PATHWAY: map00900
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Entry
map00900 Pathway
Name
Terpenoid backbone biosynthesis
Description
Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:
M00095
] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:
M00096
], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.
Class
Metabolism; Metabolism of terpenoids and polyketides
BRITE hierarchy
Pathway map
map00900
Terpenoid backbone biosynthesis
Ortholog table
Module
M00095
C5 isoprenoid biosynthesis, mevalonate pathway [PATH:
map00900
]
M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:
map00900
]
M00364
C10-C20 isoprenoid biosynthesis, bacteria [PATH:
map00900
]
M00365
C10-C20 isoprenoid biosynthesis, archaea [PATH:
map00900
]
M00366
C10-C20 isoprenoid biosynthesis, plants [PATH:
map00900
]
M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:
map00900
]
M00849
C5 isoprenoid biosynthesis, mevalonate pathway, archaea [PATH:
map00900
]
M00921
Cyclooctatin biosynthesis, dimethylallyl-PP + isopentenyl-PP => cyclooctatin [PATH:
map00900
]
Disease
H00206
Mevalonate kinase deficiency
H00527
Retinitis pigmentosa
H00663
Restrictive dermopathy
H00999
Coenzyme Q10 deficiency
H01123
HMG-CoA synthase deficiency
H01933
Porokeratosis
Other DBs
GO:
0009240
0016091
Reference
PMID:
12777052
Authors
Lange BM, Ghassemian M.
Title
Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism.
Journal
Plant Mol Biol 51:925-48 (2003)
DOI:
10.1023/A:1023005504702
Reference
PMID:
16262699
Authors
Saiki R, Nagata A, Kainou T, Matsuda H, Kawamukai M
Title
Characterization of solanesyl and decaprenyl diphosphate synthases in mice and humans.
Journal
FEBS J 272:5606-22 (2005)
DOI:
10.1111/j.1742-4658.2005.04956.x
Reference
PMID:
9858571
Authors
Sato M, Sato K, Nishikawa S, Hirata A, Kato J, Nakano A
Title
The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis.
Journal
Mol Cell Biol 19:471-83 (1999)
DOI:
10.1128/MCB.19.1.471
Reference
PMID:
24375100
Authors
Vannice JC, Skaff DA, Keightley A, Addo JK, Wyckoff GJ, Miziorko HM
Title
Identification in Haloferax volcanii of phosphomevalonate decarboxylase and isopentenyl phosphate kinase as catalysts of the terminal enzyme reactions in an archaeal alternate mevalonate pathway.
Journal
J Bacteriol 196:1055-63 (2014)
DOI:
10.1128/JB.01230-13
Related
pathway
map00010
Glycolysis / Gluconeogenesis
map00100
Steroid biosynthesis
map00130
Ubiquinone and other terpenoid-quinone biosynthesis
map00403
Indole diterpene alkaloid biosynthesis
map00510
N-Glycan biosynthesis
map00902
Monoterpenoid biosynthesis
map00904
Diterpenoid biosynthesis
map00906
Carotenoid biosynthesis
map00908
Zeatin biosynthesis
map00909
Sesquiterpenoid and triterpenoid biosynthesis
KO pathway
ko00900
LinkDB
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integrated database retrieval system