Daucus carota (carrot): 108194878
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Entry
108194878 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108194878
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_1
LRR_8
LRR_4
Rx_N
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108194878
NCBI-ProteinID:
XP_017217305
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Position
7:24457439..24467031
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AA seq
1984 aa
AA seq
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MTFLNLSFNRIRGKFSGKYVHMQEIGLSSNYFEGPLPPITTKCSNINLSKNKFSGSLHSL
SVVEDLSLSFLDISHNQLSGALSNNWMHFSGLAFLNLGYNNFSGKIPTSMGNLYNLQTLI
LRNNNLYGELPSSLKHCQGLGFVDFGLNKLSGKVPSWIGESLPQLYGLILKSNRFYGILP
REICRLSNLHFLDVSINRISGTIPSCFSNLTAMVLKGNEVVEQTYLPYYPFENSSAFVGS
QEVEKAPEEPQNYSYFDSVLARWKGQEFEYGRNFAYLKMIDLSTNKLSGEIPIGITKLVE
LRGLNLSGNYFYGKVPPEIGRLNVLECLDLSRNNFSGAIPPSMSGLNFLAYLDLSKNNFS
GRIPSGTQLQGFNISAYEQNAELCGKPLTNICPGDEPVDYIQPSSGKYEVNEEDGEYEMW
LYISAVLGFVSAFWGFIGTLLLNRRWGRAYFFFLDNCDLAAGLVRKLVSLATDEVIQVWK
LQEDLETLCQRFELIGALLHDAHTKNLIMSTAKMWFSKLEDVAQVADAFMDELEYEVTRR
KVENRHKVNAILGMGGQGKTTLARMVYNIDDVIKMFPKRMWVTVSDDFDFMMILNQMVVS
LTSRPSVLDNAEGLIKNLQEKLKGEKFLLVLDDVWNENPEEWDKLRNSLLGVGGARGSKI
FVTTRKQEVTDAMQCSDPYLVKKLTEEDSFELLKQRAFLNGGVLETEAFVALGKRMVGRC
GGLPLAIKTLGSLLYSKKSEEEWLKIQNSEIWKSKGVLSSLRLSYDNLPYSSLKRCFAYC
SIMPKDHYLYKDELIQIWMALGFLPGDRTVLMEDTGNEYFDILLGNSLLQDVEKDIYGYI
TYCKMHDLVHDLALEVSSNYSTTVNPSHEVDKGSKATYVRLEGFEDVKPSMFKLRFDTVQ
ALYAQATIFNCVLPELKYLRVLVLNSFCNELPGLIGNLKCLKHLDISKMSDSDTKYKLPN
HITRLYNLETLRISWDHELPENICQLINLRHLVIGYAETRYMFVGIERLTCLQTLPHFVV
KKNQNCLVGHLGMLKNLRGTLKIYGLHEVENIEEARKAKLCEKSNIRHLLLKWNNEDERE
KGEYNDEGYCSRCEGFPPLGHLPKLREISIKKMENVKVIGNDLCVGLSPAQKAVTSAMYP
SVTTVILRGLPKLEEWVEDIFSKGGKDQIVFPKLEKLEISDCPRLRKFLNSCFPSLKDLS
IENSESNLILETMYMHLSSLTTLDLEDIRDGVGDSSSSSSCSNLESILKVLLKNNSLSLT
SLYLCDCKGLQHLTLGVPLDNLSLHDCPNLVSINAVEGLAGLKYLSLRRIPSSLLDGISA
EIRSSTLKVLWLGPFSDEFRWPFSSSLHSFPNLVKLFLKGCENVKSIALFEQLQFFTFPA
LTKLFIFDFGGMKALVLSIEKLPCLETLRIKNSKDLERVSLFDESHCLQDLFIRMIRRGL
YDPKILQEFGPFPLASFHFRMAAPLPTSGVISKIVQVGPKFPNWIRNQRYIDHLDLSNSQ
ISDTIPIWFWNFSNPSNYLNLSSNQIRGKFSSELVYVQEIDLSSNYFDGPLPPISAECLK
INLSQNKFSGTLISLSIVENLSLRYLDISHNQLSGALPDNWMHFQGLVFLNLGYNNFSGR
IPTSIGYLVSLQTLILRSNNLYGELPSSLRNCSILGFADFGLNKLSGKVPSWIGKDLPQL
YALILKSNRFHGSMPHEICYLSNLHFLDMSINTISGTIPLCFYNLTAMIRKGSEVAEHTY
SSVDFTDIIASPPEGAPTTNFTYFDNVLARWKGQEFQYGSNFAYLKMIDLSANNLTGEIP
VGVTKLLELKGLNLSGNRFNGKVPLKIGQLKGLECLDLSANKFSGEIPQSMSGLYFLAFL
NLSNNNFSGRIPSGTQLQGFNTSTYEGNTGLCGKPLINICPGNEPADNDGRSSNEFEVEG
DDSEYERWLYISVVLGFSTTFWGMIGTLVLNRRWRYSYFLFLENLKERIYVMMVVRIGRL
QRMI
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgacatttttgaatctgtcattcaacagaattaggggcaagttttctggtaaatatgtt
catatgcaagagattggtttgagttcaaattattttgagggaccattaccaccaattaca
acgaaatgttcaaatataaatctgtccaagaacaagttctcaggatcactccattcctta
tctgttgttgaagacttatctttaagctttcttgatatttctcataatcagttatctggg
gcactttccaataattggatgcatttcagtggtttggcgtttctcaacttgggatataac
aatttttctggtaaaattccaacatcgatggggaatctgtataatctccaaacactgatt
ttgcgaaacaataatctctatggagagctgccttcatctctaaaacactgccagggccta
ggttttgtagattttgggttaaataagctatcaggaaaggtaccgtcatggattggggaa
tccctaccacaactgtatggtctaatcctaaaatctaatagattttatggaatcttgcct
cgtgaaatatgtcgtctatcaaatcttcactttctagatgtgtctattaacagaatttct
ggaaccattccttcatgcttcagtaatcttactgccatggttttaaaaggaaatgaagtt
gtagagcaaacttatcttccatattatcccttcgaaaattcatcagcgtttgtgggttca
caagaagtagaaaaggctccagaagaacctcaaaactatagttattttgattctgtattg
gcaagatggaaagggcaggagtttgagtacggaagaaattttgcttacttgaagatgatt
gatttgtcaaccaataaattgtctggagaaattccaatcgggataactaaacttgtagaa
ctcaggggactgaacttgtcgggaaactatttttatggaaaggttccacctgagattggc
cgattgaatgtgctagaatgcctagacttgtccagaaacaatttctcaggtgcaattccc
ccaagcatgtctggattaaattttcttgcctatttagatctttcaaaaaataacttttcg
ggaagaatcccatctggtactcaactccagggattcaatatctccgcatatgagcagaat
gctgaactctgtggtaaaccactcacgaatatttgtcctggagatgaaccagttgattac
atccagccttcatctggcaagtatgaagttaatgaagaagatggtgaatatgaaatgtgg
ctgtatattagtgcagtgcttggtttcgtctctgcattttggggcttcattggaacttta
ttgctaaatcgtcgttggggacgtgcatatttcttctttttggacaactgtgatcttgct
gctggactggtccgaaagctagtttcacttgcaactgatgaagtgattcaggtctggaaa
cttcaagaagatttggagacactgtgtcagagatttgaattaatcggtgctctcttgcac
gatgctcataccaagaatctaatcatgtctactgccaaaatgtggttcagcaaacttgaa
gatgtggctcaagtagctgatgcttttatggatgaactcgagtatgaagttacccgaaga
aaagtggagaatcgtcataaggtgaatgcaatactcgggatggggggtcaaggcaaaaca
actcttgcccgaatggtttacaatatagatgatgtgatcaaaatgtttcccaagaggatg
tgggtcactgtatcagatgattttgatttcatgatgattttgaatcaaatggtagtgtca
ctcacttcgaggccttctgtgctggataatgcagaaggtctgataaaaaatcttcaagaa
aagctgaagggcgaaaagtttttacttgtgctagatgatgtttggaatgagaatccagaa
gagtgggacaagttgaggaattcattgcttggagttgggggtgcgagaggcagcaaaatt
tttgttaccactcgtaagcaggaagtgactgatgctatgcagtgttctgatccttatctg
gtgaaaaaactaacagaggaagatagttttgaattgttaaagcaaagagcatttttgaat
ggaggagttttagagactgaggcatttgtggccttgggtaaaagaatggtaggaagatgt
ggcggtctccctctggcaattaaaacactagggagtttattgtactcaaagaagagtgaa
gaagagtggttgaaaatccaaaacagtgaaatatggaaatcgaaaggtgtactgtcttcc
ttgaggctgtcatatgacaatctaccttactcttctttgaagcgatgctttgcatattgt
tccattatgccaaaggatcattatctttataaagatgaattgatacaaatatggatggca
ttaggcttccttccgggggatagaactgttttgatggaagacactggaaacgagtacttt
gacattttgttgggaaattctctgttacaagatgtggaaaaggatatatacggatatatt
acctactgcaagatgcatgatcttgtgcatgatcttgcactagaggtgtcaagtaattat
tctacaactgtaaatccaagtcatgaagttgacaagggatcaaaggcaacatatgtaaga
ctggaaggattcgaagatgtaaaaccaagtatgtttaagctacggtttgatacagtacaa
gcactatatgcacaggccactatatttaactgtgtgttgcccgaacttaagtacttgaga
gttttggttttaaattcattttgtaatgagctgcctggtttaattgggaatttgaaatgc
cttaagcatttagatatctctaagatgtcagattccgatactaaatataaactgccaaat
cacatcacaagactctacaacttggagactctaagaatttcatgggatcatgagcttccg
gaaaacatctgccaacttataaacttgagacatcttgttattggctatgctgaaacaaga
tacatgtttgttgggattgagaggttaacttgtctgcaaacgctgcctcattttgttgtg
aagaaaaatcaaaactgtctcgttggacacctagggatgttgaaaaatcttagaggtacg
cttaagatctatggccttcatgaggtggagaatattgaagaagcacgtaaagcaaagctt
tgtgaaaagtccaatattcggcatttactcttgaagtggaacaatgaagatgaaagggaa
aagggagaatacaatgatgaggggtattgcagcaggtgcgaaggatttcccccactgggt
caccttcctaaactgagagagatatctataaagaagatggaaaatgtcaaggtcatcgga
aatgatttatgtgtaggcctaagtccggcccaaaaagcagtcacatcagcaatgtatccg
tcagtgacaacagtcattttacggggattgccaaagctagaagaatgggtggaagacatt
ttcagtaaagggggtaaagaccaaattgtatttcctaaactcgagaagttggaaatctca
gattgtccaaggttgagaaagttcctgaatagctgtttcccgtccttgaaagatttgagt
attgaaaattcggagagcaacttgatactggaaactatgtatatgcatcttagctcactc
accactttagacctggaggatatcagagacggagtaggggattcatcatcatcttcctct
tgttcaaacttggaatcaatactcaaagtgctattaaaaaataattctctgtctttgacc
tctttatacctatgtgactgcaagggtttacagcatctcacccttggtgtccctcttgac
aatttgtctttacatgattgcccgaatctagtaagtattaatgcagttgaaggattagct
ggtctaaaatatctctcactaaggaggatcccctcctctcttctagatggaatatccgcc
gaaattcggagttccacacttaaagtattatggttaggtcccttttcggatgaatttcga
tggccattctcttcttcattacattcattccctaacctagttaagctctttctgaaaggg
tgtgaaaatgtaaagtcaatagcgctctttgagcaacttcagttcttcaccttccctgcc
ttgactaaattatttatatttgatttcggaggtatgaaagctcttgtcctgtcaatagaa
aagcttccatgtctcgagacgttacgtattaagaatagtaaagatttggagagagtgtct
ctgtttgatgaatctcattgcctccaagatctattcataaggatgattagacgtggactt
tatgatccaaagatattgcaggagtttggtccgtttcccctagcatcgtttcacttccga
atggctgccccccttccaacttcaggagttatctctaagatcgtgcaagttggaccaaag
tttcccaactggatccgaaatcaaagatacattgatcatcttgatctgtctaacagccaa
atttcagataccatccctatctggttctggaacttttccaacccaagtaattacttaaat
ctctcttccaaccaaattagaggaaagttctcttctgaacttgtttatgttcaagagatt
gatttgagttcaaattattttgatggaccactcccaccaatttcagcagaatgtttgaaa
attaatctgtcccagaacaagttctcaggaacactcatttccctatctattgttgaaaac
ttgtcattacggtatcttgatatctcacataaccaattgtccggtgcacttcctgataat
tggatgcattttcaaggtctagtgtttcttaatttggggtataataatttttctggcaga
attccaacatctatagggtaccttgtttctctacagacactgattctacgaagcaataac
ctctacggtgaacttccttcatctcttagaaactgcagcattcttggttttgcagatttt
gggttaaataagctatcaggaaaggtgccatcatggattgggaaagacctacctcagttg
tatgctctaattctaaaatctaatcgatttcatggaagcatgcctcatgaaatttgttat
ctgtcaaatcttcatttcctagacatgtctataaacacaatatctggaaccattcctcta
tgcttttataatcttactgccatgattagaaaaggaagtgaagttgcagagcacacctac
tcttcggtggactttacagatatcattgcaagtcctccagaaggcgctccaacaacaaac
ttcacttattttgataatgtattggcaagatggaaagggcaggagtttcagtatggaagc
aattttgcttatctgaagatgatcgatttgtcagccaataacttgactggagaaattcca
gtaggggtgaccaaacttctagaactcaaaggattaaacttgtcagggaataggtttaat
ggaaaagttccactaaagattggacaattgaaaggattagaatgcttagatttgtcggca
aacaaattttcaggtgaaattcctcaaagcatgtctggattatattttcttgcgttttta
aatctctccaacaacaacttttcgggaagaattccatctggtactcaactccaaggattc
aatacttccacatatgaggggaacactgggctctgtggtaaaccactaataaatatttgt
cctggaaatgaaccagctgataatgatgggcgttcttctaatgagtttgaagttgaagga
gacgacagtgaatatgagaggtggctttatataagtgtagttcttggcttcagcactacc
ttttggggcatgattggaactttagtgctaaaccgtcgttggagatattcgtatttcctc
tttctggagaacttgaaggaacgaatttatgttatgatggttgtgcgcattggcagactg
caaaggatgatttaa
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