Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0305100-01
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Entry
Os03t0305100-01 CDS
T02163
Symbol
Os03g0305100
Name
(RAP-DB) Similar to AMP-binding protein.
KO
K01913
acetate/butyrate---CoA ligase [EC:
6.2.1.1
6.2.1.2
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00010
Glycolysis / Gluconeogenesis
dosa00620
Pyruvate metabolism
dosa00630
Glyoxylate and dicarboxylate metabolism
dosa00650
Butanoate metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Os03t0305100-01 (Os03g0305100)
00620 Pyruvate metabolism
Os03t0305100-01 (Os03g0305100)
00630 Glyoxylate and dicarboxylate metabolism
Os03t0305100-01 (Os03g0305100)
00650 Butanoate metabolism
Os03t0305100-01 (Os03g0305100)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dosa01004
]
Os03t0305100-01 (Os03g0305100)
Enzymes [BR:
dosa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
Os03t0305100-01 (Os03g0305100)
6.2.1.2 medium-chain acyl-CoA ligase
Os03t0305100-01 (Os03g0305100)
Lipid biosynthesis proteins [BR:
dosa01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
Os03t0305100-01 (Os03g0305100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
RAP-DB:
Os03t0305100-01
LinkDB
All DBs
Position
chr03:complement(join(10827144..10827380,10825413..10826003,10824285..10825181))
AA seq
574 aa
AA seq
DB search
MGSPGHGDAAERDIDDLPRNDANYTALTPLWFLERAAVVHPDRAAVVHGPVRYTWAETYR
RCRRLASALAQRSVGPGCTVAVIAPNVPALYEAHFGVPMSGAVVNCVNIRLNAETIAFLL
DHSVAEVVMVDQEFFTLAEESLKILAEKKKWSFRPPILIVIGDPTCDPKPLQYALGRGAI
EYEEFLKTGDPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYVMALGVAMVWGM
PEGAVYLWTLPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNHGVTHMCAAPVV
FNNLINAPASETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYGLSETYGPSTVC
AWKPEWDRLPLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSYGEIVMRGNAVM
KGYLKNPKANAEAFAGGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISSLEVEKVLY
AHPAVLEASVVARADEQWGESPCAFVTLKEGADSSDEAAVAGDIMRFCRERMPGYWVPKS
VVFGPLPKTATGKIKKHELRTKAKELGPVKKSRM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgccggggcatggggatgcggcggagagggacatcgacgatctcccacggaac
gacgccaactacacggcgctgacgccgctctggttcctggagcgcgccgccgtggtccac
ccggacagggccgccgtcgtgcacggcccggtgaggtacacctgggcggagacctaccgc
cgctgccgccgcctcgcctccgccctcgcgcagcgatccgtcggccccggctgcacggtc
gctgtgattgctccaaatgtcccggcactgtatgaagctcatttcggcgtccccatgtct
ggagcggtggtgaactgcgtaaacatcaggttaaacgccgagacaattgccttcctcctt
gaccactcagtggcagaggtcgtcatggtggaccaggaattcttcaccctagctgaagag
tccctgaagatactggccgagaagaagaaatggtcgttcaggcccccgatcctgatcgtc
atcggcgacccgacctgcgatccgaagcctctgcagtacgctctggggagaggagcgatc
gagtacgaggagttcctgaagaccggtgacccggagttcgcctggaagccgcccaaggat
gaatggcagagcatcgcgttgggttacacctccgggactacttcgagccccaagggcgtc
gtgctgcaccaccgtggcgcctatgtcatggcgctcggtgtcgccatggtttgggggatg
cctgagggagctgtgtacctgtggactctgcccatgttccattgtaatggttggtgttac
acttgggcaatggctgcgatgtgtggaaccaacatatgtcttcgccaggtgagttcaaag
gcgatatactctggcatagtgaaccatggagtgacacacatgtgcgccgcgccggtcgtc
ttcaacaacctcatcaacgctccggcgagcgagaccttcctgccgctcccgcgcgtggtc
aacatcatggtggccggagccgccccgacgccgtcgctgctcgcggcgctgtcgatccgc
ggcttccgcgtgacccacacgtacgggctgtcggagacgtacggcccgtcgacggtgtgc
gcgtggaagccggagtgggacaggctgccgctggaggagcggtcgcggctgcactgccgg
cagggcgtgaggtacggggcgctggagggcctcgacgtggtggacccgaagacgatggcg
ccggtggccgccgacggaaagtcgtacggggagatcgtgatgcggggcaacgccgtgatg
aagggctacctgaagaaccccaaggcgaacgcggaggcgttcgccggcgggtggtaccac
tccggcgaccttggggtgaagcaccccgacgggtacatcgaggtgaaggaccggatgaag
gacatcatcatctccggcggggagaacatcagcagcctggaggtggagaaggtgctgtac
gcgcacccggcggtgctggaggcgtcggtggtggcgagggcggacgagcagtggggggag
tcgccgtgcgcgttcgtgacgctcaaggaaggcgccgacagctccgacgaggcggcggtg
gccggcgacatcatgcggttctgcagggagaggatgccggggtactgggtgcccaagtcg
gtggtgttcgggccgctgcccaagacggcgacggggaagatcaagaagcacgagctgagg
accaaggccaaggagctcggccccgtcaagaagagcaggatgtga
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