Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0369800-01
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Entry
Os03t0369800-01 CDS
T02163
Symbol
Os03g0369800
Name
(RAP-DB) Similar to Novel plant SNARE 13 (AtNPSN13).
KO
K08494
novel plant SNARE
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os03t0369800-01 (Os03g0369800)
Membrane trafficking [BR:
dosa04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
Os03t0369800-01 (Os03g0369800)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
YkyA
DUF5089
Occludin_ELL
DNA_repr_REX1B
Mobilization_B
GCIP_C
TMPIT
Motif
Other DBs
RAP-DB:
Os03t0369800-01
LinkDB
All DBs
Position
chr03:complement(join(14518105..14518181,14516956..14517048,14516557..14516650,14516439..14516476,14516120..14516223,14515467..14515546,14515338..14515394,14515125..14515217,14514967..14515041,14514474..14514590))
AA seq
275 aa
AA seq
DB search
MASDVPMSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQLEDLTAKMKECKRLIK
EFDRILKDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGA
GSSEPAAEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRSKMVVAQTIETGTQTASALSQ
QTEQMKRIGNELDTVHFSLKKASQLVKEIGRQVATDKCIMALLFLIVCGVIAIIVVKIVN
PHNKNIRDIPGLAPPAQNFQISNRRLLSVEIIRGL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagcccggagctcgagcagatcgacggcgaggtccaggac
atcttccgcgccctccaaaatggatttcaaaagatggacaagattaaagattcaagtagg
caagctaaacagctggaggatctcacagcaaaaatgaaggagtgcaagcgtttgatcaaa
gagtttgatcgtatattgaaagatgaggagtcaaacaaccctcctgaggtccacaagcag
ctaaatgacagaaagcaatatatgatcaaagagttgaattcctatgtcaccttgaggaag
acatatcaaagtagcctaggtaataataataagagggttgagctctttgatatgggcgct
ggaagtagtgaacctgctgccgaggacaacatccaaatagcatcagctatgacaaaccaa
caactgatggatgctggaagagaacaaatgactcagactgatcaagctattgaccgttca
aaaatggttgtggcacaaactattgaaactggaacacaaactgcttcagcgctatcacag
caaacagaacaaatgaagagaattggcaatgagctggatactgttcacttttcgttaaag
aaggctagccagctggtgaaagagattggccgtcaggttgcaactgacaaatgcattatg
gcattgctttttctgattgtttgtggtgtgattgcaattattgttgttaagattgtcaac
ccacataacaagaacatccgcgacatcccaggacttgctccgcctgctcaaaatttccag
attagtaacaggagactgctgtcggtagaaattatcagaggtctatga
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integrated database retrieval system
