Oryza sativa japonica (Japanese rice) (RAPDB): Os06t0715100-01
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Entry
Os06t0715100-01 CDS
T02163
Symbol
Os06g0715100
Name
(RAP-DB) Similar to Novel plant SNARE 11 (AtNPSN11).
KO
K08494
novel plant SNARE
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os06t0715100-01 (Os06g0715100)
Membrane trafficking [BR:
dosa04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
Os06t0715100-01 (Os06g0715100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE_C
DUF948
Helo_like_N
Sec20
Zw10_N
MCPsignal
PCRF
Vps53_N
PLU-1
ING
Syntaxin_2
DUF6468
JAKMIP_CC3
EcsC
Occludin_ELL
Neur_chan_memb
RPW8
DUF5089
RmuC
BshC
ABC_tran_CTD
Motif
LinkDB
All DBs
Position
chr06:complement(join(30360830..30360903,30360449..30360541,30360069..30360162,30359935..30359972,30359669..30359757,30359438..30359517,30358990..30359046,30358815..30358899,30358708..30358718))
AA seq
206 aa
AA seq
DB search
MDLESVNPELAEIDGQIGDILRALQNGFQKLDKIKDANRRSRQLEELTDKMRDCKRLIKD
FERVVKDMAGSTDPETARMLHDRKQSMIKELNSYVALKKQYASENKRVDLFDGPSVEDGF
GEENVLLASNMTNQQLMDQGNQLMDETDQAIARSKQTVQETINVGTETAAALKSQTEQMS
RIVNELDSIHFSIKKASQMVKEIGCN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggatttggagtcggtcaacccggagctcgccgagatcgacggccagatcggcgacatc
ctccgcgcattgcaaaatgggttccagaagctggataagatcaaggatgccaatcgacgg
agcaggcaactcgaagagctcactgataagatgcgggattgcaagaggcttatcaaggac
tttgagcgagttgtcaaagatatggcaggaagtaccgatcctgagactgctaggatgctt
catgataggaaacagtcaatgatcaaagaattgaactcctatgttgctttgaagaaacaa
tatgcaagtgaaaataagcgagttgatctttttgatggcccaagtgttgaagatggcttt
ggtgaagaaaatgtcctgttagcatcaaatatgacaaaccaacagttaatggatcaagga
aaccaactaatggatgagactgatcaagctattgcaagatctaaacagaccgtccaagag
accatcaatgtaggtacagaaactgcagctgctctcaaatcacagacagagcaaatgagc
agaattgttaatgagctggattccattcatttctccattaaaaaggcatcacaaatggtg
aaagaaattggttgcaactga
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integrated database retrieval system
