Oryza sativa japonica (Japanese rice) (RAPDB): Os07t0637400-01
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Entry
Os07t0637400-01 CDS
T02163
Symbol
Os07g0637400
Name
(RAP-DB) Similar to Novel plant SNARE 12 (AtNPSN12).
KO
K08494
novel plant SNARE
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os07t0637400-01 (Os07g0637400)
Membrane trafficking [BR:
dosa04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
Os07t0637400-01 (Os07g0637400)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Occludin_ELL
Tox-PLDMTX
Prominin
ABC2_membrane_3
DNA_repr_REX1B
GCIP_C
Motif
Other DBs
RAP-DB:
Os07t0637400-01
LinkDB
All DBs
Position
chr07:join(26501589..26501665,26501882..26501974,26502214..26502307,26502402..26502439,26502579..26502670,26502759..26502838,26502912..26502968,26503085..26503177,26503346..26503420,26503847..26503948)
AA seq
266 aa
AA seq
DB search
MASDVPMSPELEQVDGEIQDIFRALQNGFQKMDKIKDSNRQSKQLEDLTGKMRECKRLIK
EFDRILKEDEKKNSADVNKQLNDKKQLMIKELNSYVTLRKTYQSSLGNKRIELFDTGNDQ
VAEDNTVQMASEMSNQQLMDAGRKQMDQTDQVIERSKKVVAQTVEVGSQTAAALSQQTEQ
MKRIGNELDSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNK
NIRDIPGLAPPAQNRKLLSIESFGSL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagccccgagctggagcaggtggacggcgagatccaggac
atcttccgcgcgctccagaatgggttccagaagatggacaagatcaaggactccaacagg
cagtccaagcagctggaagatctcaccgggaagatgagggagtgcaagcgcttaatcaaa
gaatttgatcgtattctcaaagaggatgagaaaaagaactcggctgatgtcaacaagcag
ctaaatgataagaagcagctgatgatcaaagaattgaattcctatgtcacattgaggaaa
acgtaccaaagcagcctgggtaataagaggattgaactatttgatactggtaatgatcag
gtggccgaggacaacactgttcaaatggcatcagaaatgtcaaatcaacaactcatggat
gccggaaggaaacagatggaccaaacagatcaagttattgagcgttcgaaaaaggttgtt
gcacaaaccgttgaagttggatctcaaactgctgcagctctatcacaacaaacagaacaa
atgaagagaattggcaatgagctagactcggttcacttttcactgaagaaggctagccaa
atggtgaaagagattggtcgccaggttgcaactgacaaatgcatcatggcattcctattt
ctgatagtctgtggtgtgattgcaatcattgttgttaagattgtcaaccctcacaacaag
aacatcagagacatcccaggactggcaccacctgcgcagaacaggaagctcttgtccata
gaatctttcggaagcctctga
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integrated database retrieval system
