Danio rerio (zebrafish): 110438673
Help
Entry
110438673 CDS
T01004
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
110438673
04121 Ubiquitin system [BR:
dre04121
]
110438673
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
110438673
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110438673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
110438673
NCBI-ProteinID:
XP_021327416
UniProt:
A0A8M9PYK6
LinkDB
All DBs
Position
6
Genome browser
AA seq
661 aa
AA seq
DB search
MELVGKKNATSPIWQYFGFTPDEKGEPADVTQAVCRLCSKVVPVKGSQTTNMYVHLRGRH
PAEAAKLAPREGTISKDRSQPSIIGAFSKSTKYKRNSERWAQCTAAVSKYIAKEMVSYHT
VEKASFKDLLQTFDKQYELPGRKYFTETAIPNLYNETRDIIAKDLKAANFVALTTDMWSS
INMTPYMSVTVHYISEDWKLEAKCLETTFIPENHTAEVLAEALSDAMQDWDIEPSKISCI
TTDNGANIVAAIRRLGWPWLNCYGHNLNVAVNYSLQKEKTKTDRALGICRNINGAFSHSW
KRRQELRKAQEQLNLPQRMLITDCTTRWGSTYAMVVRFLEQLPAIKRVFADDKSRRGTLP
NVTWQDIAVLEAVRDGLKPVAEFTDILSAENYVTVSSLLPMLQLTKDILKEEETDVEMTA
GIKRRILEKLNSKYDDSTLQLMRKSTLLDPRYKGDHIDAAQLDVIKSQLEVEMVEYWNMP
PVPIRVEEEEEDDAAGTSSSENQPAKRIKTLGRLLGRAKPSVSTSTPVDQRAKSEITSYL
QEEVIDGDDKPLDWWKENRRRFPLMANLAKKYLCVTATSTPSERVFSAAVCVEPFCQCES
PSGSLDLSAESAPLPGLCDIQDLSSLFALVFMHACVCPSLHPSLRIAPQVKRRQPIVTLS
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtgggaaagaaaaatgccacatcgcctatttggcaatatttcgggtttaca
ccagatgaaaaaggtgaacccgccgatgtcacgcaggcagtttgcagactttgctcgaag
gttgtgccggtaaaaggatcacaaaccacaaacatgtatgtacatttgcgtggccgccac
cctgctgaggctgctaaactagcgccaagagaaggcacgattagcaaagatcgaagtcag
ccatcaatcatcggagctttttcaaaaagcacaaagtataaaagaaacagtgaaaggtgg
gctcagtgcactgcagctgtatcgaagtacattgcgaaggaaatggtctcctatcataca
gtcgagaaagcaagctttaaagacctgctccaaacctttgataaacagtacgagctgcct
gggcgcaagtacttcaccgaaacagctatcccaaacttgtacaatgaaactagggacatc
attgctaaagatctgaaagctgctaactttgttgctttgaccacagacatgtggtcaagc
ataaacatgaccccctatatgtctgtgacagtccattatatttcggaagattggaagctc
gaagcaaaatgcctggaaacaacatttattccggagaatcacactgcagaggtactggct
gaggcgctgtcagatgccatgcaagattgggacatagaaccgagtaaaatttcatgcatt
acaactgacaacggggccaatattgttgcggccatacgaaggctcggatggccatggctg
aactgttatggccataacttgaatgtggcagtgaattattctctacaaaaggagaaaaca
aaaactgatcgcgctcttggaatctgtcgcaatattaacggggcattttctcacagctgg
aagaggcgacaagagctccgcaaggcgcaggaacagctaaatttacctcaacgtatgctg
ataacggattgtacaactcgttggggatcaacatatgccatggtagtaagatttctggaa
cagcttcctgccatcaaaagggtttttgctgatgacaagagccgtcgtggaacactccca
aacgtgacctggcaggacattgctgtactagaggctgtcagggatgggttgaagcctgtc
gcagaatttactgatattttatcagctgaaaattacgtgacagtctcatctctgctgccc
atgctgcagctaacaaaggatatcctgaaggaggaggagactgatgtggagatgacggca
ggaattaaacggcggattttggagaaactcaactcgaaatatgacgacagtaccctccaa
ctaatgcgcaaatctaccctccttgacccacgctataagggcgaccacatcgatgccgca
caacttgatgtgatcaaatcacagcttgaggttgagatggtggaatattggaatatgcca
cctgtacccatcagagtggaggaggaagaggaagatgatgcggcaggtacgtcatcaagt
gagaatcagccggctaagaggatcaaaacactgggtcgtcttcttgggagagcaaagccg
tctgtgtccacatccacacctgtagaccagcgcgcaaaatctgaaatcacgtcttactta
caagaggaagtaattgatggtgatgacaagccactggactggtggaaagaaaatagacgc
cgttttcctttaatggcaaacctggcaaaaaaatacctgtgtgttaccgcaactagcacc
ccttcagagcgcgtgtttagcgcagccgtctgtgtggagcccttctgtcagtgtgaatca
ccttcaggcagtctggatctctcagccgagtctgctccactgcctggcctgtgtgacatt
caggatttgtctagcctgtttgcgcttgttttcatgcatgcctgtgtttgtccgtcactc
catccatcacttagaatagcaccacaggtgaagcgaagacagccgatagtaaccttgagc
tggtaa
DBGET
integrated database retrieval system
