KEGG   Danio rerio (zebrafish): 64691
Entry
64691             CDS       T01004                                 
Symbol
mhc2a1
Name
(RefSeq) major histocompatibility complex class II integral membrane alpha chain gene 1 precursor
  KO
K06752  MHC class II antigen
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04145  Phagosome
dre04514  Cell adhesion molecules
dre04672  Intestinal immune network for IgA production
dre05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    64691 (mhc2a1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    64691 (mhc2a1)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    64691 (mhc2a1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    64691 (mhc2a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    64691 (mhc2a1)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   64691 (mhc2a1)
  Exosomal proteins of epithelial cells
   64691 (mhc2a1)
  Exosomal proteins of breast milk
   64691 (mhc2a1)
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig C2-set_2 C2-set_3 I-set SSB_1
Other DBs
NCBI-GeneID: 64691
NCBI-ProteinID: NP_571770
ZFIN: ZDB-GENE-040912-179
LinkDB
AA seq 236 aa
MDLFGFLLTFTVILSNVAQAEHRDVDFFGCSDTEKEYLQGFDGEELYHSDFIRKVGVVTA
PDFADPMSYPGFYENSVAQMEVCKQDLATDIKAYNSPEEQLDPPVTSIYSEDEVVLDERN
TLICHVTGFFPPPVNVSWTKNNDIVTEEISFSQYRRNSDGTFNMFSALKFTPAEGDIYSC
TVNHRSIQGQPNTKTWEVDVELPSVGPAVFCGVGLVLGLLGVAAGTFFLIKGNNCN
NT seq 711 nt   +upstreamnt  +downstreamnt
atggatctctttggttttttgctgacattcactgttattttgagtaatgtggctcaagct
gagcacagggatgttgacttttttggatgttctgacacagaaaaagaatatttgcaagga
tttgatggagaggagctgtaccattcagacttcattagaaaagtaggagtagtgacagcg
cctgactttgcagatcctatgagctatcctggattttatgagaatagtgttgctcaaatg
gaggtctgcaaacaagatttagccacagacatcaaggcatacaactctccagaagagcaa
ctagaccctcctgtgacatccatctattcagaagatgaagtggttctggatgaaaggaac
acactcatctgtcatgtgactggattcttccctccacctgtcaatgtctcctggacgaaa
aacaatgatattgtgacagaggaaattagttttagccaataccgcagaaacagtgatggc
accttcaacatgttctctgctctgaagttcacacctgctgaaggagacatttacagctgc
acagtgaaccacagatctattcaaggccaacccaacaccaaaacatgggaggtggacgtt
gagctgcccagtgttggaccagcagtgttctgtggagtgggtctggttttggggctgttg
ggagtcgctgctggaacattcttcctcattaaaggaaacaactgcaactga

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