GenomeNet   MGENOME: T30866 (Metagenome)
Entry
T30866            Meta      Genome                                 
Org code
52_SRF_0d2-1d6
Name
Tara Oceans sample - 52_SRF_0d2-1d6
Annotation
GhostKOALA
Data source
Original DB
Comment
"Station"="52_SUR"
"Station.number"="52"
"Depth.label"="SUR"
"Filter.size"="0d2-1d6"
"Region"="IO"
"Mean_Date"="5/17/10 3:56"
"Mean_Lat"="-16.957033"
"Mean_Long"="53.985183"
"Mean_Pressure_Digiquartz [db]"="5.5"
"Mean_Depth [salt water, m]"="5.539583"
"Mean_Temperature [ITS-90, deg C]"="27.8684"
"Mean_Salinity [PSU]"="34.566667"
"Mean_Oxygen, adjusted [umol/Kg]"="191.68"
"Mean_Nitrates, adjusted [umol/L]"="NA"
"Mean_Chloro HPLC adjusted [mg Chl/m3]"="0.176565"
"Mean_Angular scattering coef, at 117, 470 nm, adj in situ dark [m-1 Sr-1]"="0.000087"
"Mean_bbp470, adj in situ dark [m-1]"="0.000911"
"Mean_Fcdom, factory [ppb QSE]"="1.037917"
"Mean_beam attenuation coef, 660 nm, adjusted deep zero [m-1]"="0.04609"
"Mean_Flux_150m"="0.118947"
"Mean Depth MLD Sigma (m)"="47"
"Mean Depth Max Fluo (m)"="71"
"Mean Depth Max N2 (m)"="69"
"Mean Depth Max O2 (m)"="333"
"Mean Depth Min O2 (m)"="441"
"Mean Depth Nitracline (m)"="147.5"
"FLAG SEASON 1-4 (Spring-Summer-Autumn-Winter)"="3"
"SEASON PART 1-3 (early middle late)"="2"
"NO2 [umol/L]"="0"
"PO4 [umol/L]"="0.12"
"NO2NO3 [umol/L]"="0"
"SI [umol/L]"="2.67"
"Okubo-Weiss"="0.467374"
"Lyapunov_exp."="0.050949"
"grad_SST_adv"="1.767251"
"retention"="0"
"AMODIS:CDOM"="0.79622"
"AMODIS:PAR8d,Einsteins/m-2/d-1"="33.904"
"AMODIS:PARm,Einsteins/m-2/d-1"="37.865"
"NPP_8d_(VGPM)_[mgC/m2/day]"="122.80175"
"NPP_month_(VGPM)_[mgC/m2/day]"="172.66325"
"total.hetero"="425006.0862"
"total.auto"="206037.4323"
"total.bacteria"="631043.5185"
"total.pico.euk"="3912.877053"
Other DBs
EBI-ENA: ERR599098 ERR599139
PANGAEA: TARA_B100000212
Statistics
Number of nucleotides:     288582480
Number of protein genes:      539034
Phylum distribution:
Function distribution:
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