Lotus japonicus: Lj5g3v0196790.1
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Entry
Lj5g3v0196790.1 CDS
T04348
Symbol
Lj5g3v0196790.1
Name
(Kazusa) -
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
lja
Lotus japonicus
Pathway
lja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Lj5g3v0196790.1 (Lj5g3v0196790.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
Lj5g3v0196790.1 (Lj5g3v0196790.1)
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Lj5g3v0196790.1 (Lj5g3v0196790.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40
ANAPC4_WD40
NBCH_WD40
WDR54
Utp12
VID27
MIOS_WD40
Motif
LinkDB
All DBs
AA seq
923 aa
AA seq
DB search
MKNHSIVAKQEQPNRKGGIFEPHRAIGCITTGVPFSIQRLGTETFVTVSVGKAFQIFNCA
KLTLLLAGPLLPKKITALASYRDYTFAAYGTNIGVFKRAHQVATWSSHSAKVKLLLVFGD
HVISVDADGDMFMWAFKGNEESNVVPFKHIKLDEKFSPSCIMHPDTYINKVLIGSEQGPM
QLWNISTEKKIFEFKGWNSPITCCVASPCLDVVAVGCADGRIHVHNIKYDEELCTFTHST
RGSVTALSFSTDEQPLLASGGSSGVISIWNLEKKRLHSVVKEAHDSVITSLHFFANEPVL
MSSSADNSIKMWIFDTSDGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSV
VQDQQSRELSQRHVSKRAKILKVKEEEIKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAY
VWRLQNFVLGEHILNPCPENPTPVKACAISACGNFAILGTAGGWIERFNLQSGLHRGAYI
DKSESRSCAHDGEVVGVACDSTNTRMISAGYQGDIKVWDFKKLEVISRLEIGCSVIKIVY
HRYNGLLATVANDLTIRLFDVVACRLVRNFGGHTDRITDLCFSEDGKWLLSSSMDGSLRI
WDVMLARQIGLIEVDVPITALSLSPNMDVLATTHVDKNGVYLWVNRQMYSGTSNVDSYAS
GKEVVSVKLPSISSTERSQVEHSNELENTSQPEDVQGFPAQYKQIPDLVTLSLLPKSQWQ
SLINLDIIKVRNKPIEPPKKPEKAPFFLPSVPSLSGEILFEPGKLSEKEDGTGGEKPMSR
TRLEATPSRFLYLLQTSKETDSYGAFTDYIKGLSPSALDMELRMLQVIDDDDQQEAENRP
EFVSIEQLLDYFIYELSCRNNFEFIQAVIRLFLKIHGETIRKQPHLQEKARKLLDVQRMV
WERVDKLFQSTRCWVAFLSKTQI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccattcaatagtagcaaagcaagaacaacccaatcgaaagggaggtatattt
gaacctcacagagcaatcggatgcatcaccaccggcgtccccttctccattcagagactc
ggcaccgaaactttcgtcactgtcagcgtcggtaaagcttttcagattttcaactgtgca
aagctcactctgctcctcgctggtcctttactgccgaaaaagattactgctcttgcctct
tatcgtgattacacttttgctgcatatggaaccaacattggagttttcaagcgcgcgcat
caggttgccacttggagcagccatagcgccaaggttaaattgctgctggtgtttggagac
catgttattagtgttgatgctgatggcgacatgttcatgtgggcgtttaaggggaatgaa
gagagcaatgttgtcccgtttaagcatattaagctagatgagaaatttagccctagctgt
ataatgcatccagatacttacattaataaggttcttattgggagtgagcaaggccctatg
cagctttggaacattagcacggagaaaaaaatatttgagttcaaggggtggaattcacct
atcacctgttgtgttgcatccccttgtctcgatgttgttgcagttggctgtgcagatgga
aggattcatgttcacaatatcaaatatgatgaagagttgtgtacatttacacattctaca
cgtggttctgtgactgctttatctttcagcactgatgaacaaccccttctagcttctgga
ggttcttctggtgttataagcatatggaatctggaaaagaaaagactccattcagttgtg
aaagaggcgcatgatagtgttatcacatcgctacatttttttgctaatgagccagtgctg
atgagttcatcagcagacaactctattaaaatgtggatttttgacacaagtgatggtgac
cctcgccttttgcgctttcgaagtgggcatagtgcacctcccctttgcataaagttttat
gccaatggaagacatattctttctgctggtcaggatcgtgcttttcgccttttttctgta
gttcaggatcaacaaagtagggagctttctcaacgccatgtttctaaacgtgctaagata
ctgaaagtgaaggaggaagaaataaaattgaagcctgtgattgctttcgattgtgctgaa
attagagaacgtgattggtgcaatgtggttacttgccatatggatactgcccaagcatat
gtgtggagacttcaaaattttgttcttggtgagcatatattgaatccgtgccctgaaaat
ccaacacctgtaaaggcttgtgcaatcagtgcttgtggcaattttgccattttagggaca
gcaggtggttggattgagaggtttaaccttcaatctggacttcacaggggtgcttacatt
gacaagtcagaatcaagaagttgtgctcatgatggtgaagtcgttggcgttgcttgtgac
tcaacaaacacacgcatgataagtgcaggatatcaaggagatataaaggtttgggatttc
aaaaaacttgaggttatatccagattggagatcggttgttctgttattaagattgtttac
catcgttacaatggtctcctggctacagtagcaaatgatcttacaatcagattgtttgac
gtcgtggcttgccgacttgttcgtaattttggaggtcacacagaccgtataacagacttg
tgtttcagtgaggatggaaagtggcttctctcatctagtatggatggaagtcttagaatt
tgggatgtgatgttagcaagacagataggtttgatagaagtcgatgtgcctatcacagca
ttatctctgtccccaaacatggatgttttagcaactacccatgttgataaaaatggggta
tacctgtgggtaaaccggcaaatgtattctggtacttcaaatgttgattcgtatgcaagt
ggaaaagaggtcgtgagcgtcaagttgccatctatatcttccacagaacgttctcaagtt
gagcattctaatgaactggagaatacctctcaacctgaagatgttcagggtttcccagca
caatataagcaaatacctgatttagttacactttcattgctgccaaagagccagtggcaa
agtttgatcaatttggacataataaaggttcgcaataaaccaattgagcctccaaaaaaa
cctgaaaaggctccattcttcttgccttcagttccatccctctctggggaaatacttttt
gagcctggtaagttatcagaaaaggaggatggaacaggtggtgaaaaaccaatgagcagg
acaagattagaagcgacaccgtcccgttttctgtatcttcttcaaacctcaaaagagaca
gacagttatggagcattcactgattatatcaaagggttatcgccatcggccctggatatg
gaacttcgaatgcttcaggtcattgatgacgatgatcagcaagaagctgagaatagacct
gaatttgtatcaattgaacagcttctggattattttatttatgagctctcctgcagaaat
aattttgagtttattcaagctgttatcaggctatttttgaagatacatggtgagacaata
cggaaacagccacacttacaagaaaaggcaaggaagcttctagatgttcagcgcatggta
tgggagagggtagataaattgttccaaagtacaaggtgttgggttgcgtttcttagcaag
acccaaatttag
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