Musa acuminata (wild Malaysian banana): 104000875
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Entry
104000875 CDS
T03447
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104000875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
104000875
Enzymes [BR:
mus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104000875
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104000875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
104000875
NCBI-ProteinID:
XP_009421292
UniProt:
A0A804KW10
LinkDB
All DBs
Position
10:22396401..22407565
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AA seq
718 aa
AA seq
DB search
MGSSDQEFSTPPPASRQFGITKPISTAGPTETDLKRTIELEEFLVDAGLHEISEEATKRE
EVLGEIDKIVKSWVKQLTRQRGYSDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPS
YVNREEDFFIILHDILAEKEEVSELQPVPDAHVPVMKFKFHGISIDLLYASISRLVVPQD
LDISHGSVLYDVDEATVRSLNGCRVADQILRLVPNIENFRTALRCLKFWAKRRGVYSNVT
GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWD
PRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQIGNKICEDIELNKAGWGAL
FEPYLFFETYKNYLQVDIVAVDAEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPNE
YEDPSKQCSHCAFFMGLQRKQGVKIQEGQQFDIRGTVDEFRHEVNMYMFWKPGMELYVSH
VRRKQIPSYVFPEGYKRPRPSRVICQQLVDKTSGEDIGEECEGGSSERRLKRKGDADCSG
ARPNKPEKRASISPTHEKLPTTDQQDHEEVIFNDSVDVRANSLKDLMAVKGIEDCVEASC
GNDKDDNARKLANGSSFLECGEASAGDLFCNSEMIKVDLEQFAGSNCTIVGGSQELVDDD
KQGTSPETEHLKNGSAQNGVADVSEPNLALGVALEAHGSVTADAPQKPALRLSLTSTA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggtagttctgatcaagagtttagcacacctccgcctgcttcaagacagtttggtata
acaaagccgatctcgacagctggacctactgagactgatctcaagaggacaattgagctt
gaagaattcctggttgatgccgggctccacgagatcagcgaagaagctaccaagagagag
gaggttttaggagaaatagataagattgtcaaaagctgggtgaagcagttaactcgtcaa
aggggttactccgatcaaatggttgaagaggcgaatgctgtcatttttacatttggttct
tatcgcttgggggttcatgggcctggggctgacattgatactttatgcgttggaccttcc
tatgttaaccgagaggaggactttttcattatcttgcatgacattttggctgaaaaggag
gaagtttctgaacttcagccagtgcctgatgctcatgttcctgttatgaaatttaaattt
catggaatatctattgatctcctatatgccagtatatcacggttggttgttcctcaggat
ctggacatctcccatggatctgtgctttacgatgttgatgaggcaactgttagaagtctt
aatggctgcagggtagcagaccaaattcttcggctggtgccaaatattgagaattttaga
acagctctcagatgcttgaagttttgggctaagaggcgtggagtttattcaaatgtgact
ggatttcttgggggtgttaattgggctctattggttgctcgtgtctgccagctttatcct
aacgctgtgccgagtatgctagtttctcgattcttcagagtttatacacaatggcgctgg
ccaaatccagtaatgttgtgtgctattgaggaagatgaacttgggttccctgtgtgggat
ccacgtaagaacccacgagatcgaactcatcatatgcctattattactccggcatatcca
tgcatgaattctagctataatgtatcaacaagcacactgagagtcatgatggaacaattt
caaattgggaacaagatctgtgaagatattgagttgaacaaggcaggttggggggctctg
tttgagccctatcttttctttgagacatacaaaaattatcttcaggttgacattgtcgct
gttgatgctgaggatctacggttatggaagggatgggttgaatctcggttgaggcagttg
actctgaagatagagcgggacacttatggcatgctgcagtgccatccctaccccaatgag
tatgaggatccctcaaagcagtgttcgcattgtgctttctttatgggcttgcaaaggaaa
caaggtgtgaagatacaagaaggccaacagtttgatatacgtggaactgttgatgagttc
aggcatgaagtgaacatgtatatgttctggaaacctgggatggaattatatgtttctcat
gtccgtagaaagcaaataccctcttatgtgtttccagagggttacaagaggcctcgtcca
tcaagggtcatctgccagcagctggttgataaaacttctggtgaggatataggggaggaa
tgtgaagggggatcctcagagcgtcgtcttaagcggaaaggtgatgctgattgctcaggt
gctagaccaaataaacctgagaaacgggcttcaattagccctactcatgagaaacttcca
actactgatcaacaagatcatgaagaggtgatattcaatgattcagtggatgttagagct
aatagtctgaaggacttgatggcagttaagggcatagaggattgtgtggaagcatcttgt
ggaaacgacaaagatgacaacgctaggaagcttgcaaatgggtcctcatttttggagtgt
ggtgaagcttcggcaggagacttgttttgtaattcagagatgataaaggtggatctggag
cagtttgctggaagtaattgtaccattgtgggtggcagccaagaactagttgacgatgac
aaacaagggaccagcccagagacggaacatttgaagaatggatcagcacaaaatggtgtg
gctgatgtgtcggagccaaacctggcacttggagtggccctcgaagctcatggaagtgtg
actgctgatgctccgcagaagcctgctttaaggttgagtctgacttcaacagcataa
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