Phaseolus vulgaris (common bean): PHAVU_005G013600g
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Entry
PHAVU_005G013600g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
PHAVU_005G013600g
03036 Chromosome and associated proteins [BR:
pvu03036
]
PHAVU_005G013600g
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PHAVU_005G013600g
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PHAVU_005G013600g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HHH_9
Spt6_S1
HTH_44
Tex_N
Motif
Other DBs
NCBI-GeneID:
18629742
NCBI-ProteinID:
XP_007148779
UniProt:
V7BUR3
LinkDB
All DBs
Position
5:complement(1175719..1183449)
Genome browser
AA seq
1544 aa
AA seq
DB search
RDGKLKRLRKGRVDSGLIEYSSNDGESFFDDIAEDDLADFIVDEEVVFLEKADFLRQVKF
KGIKHSPSLSKGVKRSFGKEGRLEKHMENYQIQPVDPNKYKSLIPADTCVAGEDIDIDIP
ERMQIIQDIVGSQIDRMSLEEESSWILGQLASNINPLFSEANSCRLVHTAKREDIISFLE
LHLTMKHDIPFIAMYRKEQCLSLLEDPKSDDESENISLKWHKMLWIIQELDKKWWLLQKR
KDLLMEYYNKHFEEKHQLSFLVEESSFHAQIFYSITNMLKNAETETEIDDIDRRFNLQFP
PAEEIFDDGFRRPMTKSCYYNCNKAGLGSLSSKFGNPEKFSSLVTLSQVGTNTEEYLEES
PEQIASMYKCETFQTSEAVLKGARHMAAVMLSSEIPFRKYVRTMFFDKALVSTNPTLEGN
VTIDSFHEFAGVKWLRDKPLPKFEDSQWLLIQKAEEEKLLQVKIQLPDHTINELTMTCND
AYLKGSEGISTRLWNEQRKLILQDVILNFLLPSMEKEARMLLNAKAKNCVLMKYAMQLWN
RVSVAPYLKDVSDTVQQKGVMACCWGNGKPGTTFVMLDSEGELLDVIHARSLTLRSQQII
DQQSRKNDQQCVLRFLTTHQPQVIVIGADNASCLRLREEINEIISMISDSEHNFQNFSQG
MKGPPTVVLGDEGLPRLYEDSEISTRQLPRQHGIVRRAVALGRYLLNPLAMVATICGVKN
EIVSWKVTPLEKFLTSDEKLKIIEWVMTDVTNQVGIDINLAVRHDWLLAPLQFVSGLGPK
KAGILSRELLGGAGVRNRSDFAKFGLNTKRVFCNAVGFLRVSNCDDVVVNTLDRTRIHPE
SYNLSEELARAVYTKLVQENPEADVSEESAIECIQNDPDLLKIFDLNEYADRLEIENGEN
KRVTLFDIKMELLHGFKDPRRPYTEPTQDEEFCMIAGETEDVLVEGKRVQATVRKVLPPL
AFCVLHSGLTAVLFKEDFSDETENISLTEKLREGAVLACKIKLVDKSKCRVNLTCKVSEL
KNNGDQSFHDMDPYYHQGKTISTSQLEGTNKVKLGNKHLMPRMISHPNFQNITADQAKQF
LADQELGKYIFHPSSRGLYYLTISLKICNGVYVHKDIVEGGKGSDLKKLAELGETLKIGE
ETFEDINQVIELYVNPLVVHLKAMLNFRKFKNGTKAEVDERLKHEKDEYPNRIAYGFGIS
YEHPGTFILSYIRSTNPHHEFVAIHPKGFKFRKQIFENIELLVGYFQNHINDNVALAKSS
IKVGSASESLSGGWRNNSVDQSESKAYNDNRGGRGPRRGRGDRGRGFGPRSGSRDDCGDD
SFAAGKSWEVRGSGEGNGGGRQGRGRGRGRGRGGRGRQGDRNDGGFEHGEDRGRGRGRGR
GRGRGRWGSQVSDDQGGGGGWGGNNHGSRNYSNGDYSDGYKGSDWGQGPDEGRGWRGSQG
NSQGYGGWGGNNSNEERNEENRGNGGFGSDNLGWGKNADPSGSGGGGGGGWGWKGGKHWN
EENRGNGGSGSDNLGWGKNAAPSGGGGGGSAGGGGGWGWKGGQG
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
agagatggaaaattgaagaggcttaggaagggtcgtgtagactctggactgatagaatac
tcttccaatgacggagaatcattctttgatgatattgctgaagatgacttggcagatttt
atagtggatgaagaggttgtcttcctcgagaaggcagattttctcagacaagtaaagttt
aaaggcataaagcattcaccttcactttcaaaaggagtcaaacgtagttttggcaaggaa
ggtcggttggaaaagcacatggagaattatcaaattcagcctgttgatcctaacaagtat
aaatcgctcatccctgctgacacgtgtgtagctggagaggatattgacatagatatacct
gagaggatgcagataattcaggacattgtaggatctcaaattgacagaatgagtctagaa
gaagaaagctcttggatactaggtcaactagcatcgaacataaatccattatttagtgag
gctaactcctgcagactggtccatacagcaaaaagggaagatattattagtttcttggaa
ttacaccttacaatgaaacatgatattccttttattgcgatgtaccgtaaggaacaatgc
cttagtcttctagaagatccaaaatcggacgatgaatcagaaaatatatcattgaaatgg
cacaagatgctctggataatccaagaattggataaaaagtggtggcttcttcagaagcgg
aaggacctgctcatggaatactataacaaacattttgaggaaaaacatcaactgtctttc
cttgttgaagaatccagttttcacgcgcagattttttattcaatcaccaatatgctcaag
aatgctgaaacagagactgagattgatgatattgataggaggtttaatttgcagtttccc
cctgccgaggagatttttgatgacggttttagaaggcctatgacgaaatcatgctattac
aattgcaataaggcaggactcgggtcactttcaagcaaatttggcaatcctgagaaattc
agttctttagttactctttctcaagtgggaacaaacacagaagaatatctggaggaatct
ccagagcagatagcttcaatgtacaagtgtgaaacctttcaaacttccgaagctgtactt
aaaggggctaggcacatggcagcagtgatgctaagcagtgagattcctttcaggaaatat
gtccgcaccatgttttttgacaaggctttagtttcaactaaccctacactggaaggaaat
gtaactatagattcctttcatgaatttgctggtgttaagtggttgcgggacaaacctctc
ccgaagtttgaggattcccagtggctattaattcagaaggctgaagaagagaagcttctc
caagttaaaatacaattgcctgatcataccataaatgaattgacaatgacctgtaatgat
gcctacctcaaaggtagtgaaggaatatcaactaggctttggaatgaacagcgtaaatta
atcctccaggatgtgattttaaattttcttttgccttctatggagaaggaagcacggatg
ttgttaaatgctaaggctaaaaactgcgtattaatgaagtatgcaatgcaattatggaac
agggtctctgtggcaccgtatttgaaagatgttagtgacactgtacagcagaagggagta
atggcgtgttgttggggaaatggaaaaccaggtacaacatttgtcatgttggactctgaa
ggagaattgcttgatgtgatacatgctcggtcgcttacactgcgatctcaacaaatcatt
gaccagcagagcaggaaaaatgatcaacagtgtgtcctcaggttcctaacgacacatcaa
ccacaagttatcgtaataggagcagataatgcgtcctgtttaaggttgagggaggagatt
aacgagattatttccatgatctcagactcagagcacaattttcaaaacttcagtcaagga
atgaaaggaccacctacagttgtattaggggatgaaggcttgcctcgtctttatgaagat
tcagaaatttccacgagacagcttcctagacagcatggcattgtcaggcgagctgtggct
cttgggcgttaccttctaaacccactggctatggtggcaacaatatgtggagtgaaaaat
gaaattgtatcttggaaggtgacccccctggagaaattcctaacaagtgatgagaagttg
aagataattgaatgggtcatgacagatgttacaaatcaagtaggcatagacataaatttg
gccgtcagacatgactggctgttggctcctttgcagtttgtttctggtcttggacccaag
aaagcgggtattttgagtagagaattacttggtggtgctggtgtgagaaatagaagcgat
ttcgctaaatttgggctgaacacaaagagggttttctgcaatgctgttggctttttacgt
gtttctaattgcgatgatgtagttgtcaatactctggaccgtacaagaattcatccagag
tcgtacaatctctctgaggaattagcaagagctgtttacacgaaacttgttcaggaaaat
ccagaagctgatgtttccgaagagagtgcaattgaatgtattcaaaatgatccagacctg
ctcaaaatttttgatttaaatgaatatgctgatagattggaaatagaaaacggtgagaac
aaaagggttaccctttttgacataaagatggaattactccatggttttaaagatcctagg
aggccttatacggaaccaacccaagatgaggagttttgcatgatagctggagaaactgag
gatgtgctagtagaaggaaaaagagtccaggcaacagttcgtaaggtgctgcctccactg
gcattttgtgtccttcactctggattgactgcagtactttttaaggaagacttttcagat
gaaactgagaatatctctttaacagaaaaattgcgtgaaggtgctgttctagcatgcaag
atcaaactagttgacaagagcaaatgccgagtaaatctgacttgtaaggtgagtgagttg
aagaataatggcgaccaaagtttccatgacatggatccttattaccatcaaggaaagacc
atttcaacgagtcaattggagggaacaaacaaggtgaagcttggaaataaacatttaatg
cccaggatgatttctcaccctaattttcaaaatataactgcagatcaagcaaaacagttc
cttgcagatcaggaacttgggaaatatatctttcacccaagttcaaggggtctatattat
ttgaccatctctcttaaaatttgcaatggtgtttatgtacacaaagacatcgtggaaggt
ggaaagggtagtgatttaaaaaagttggcagaacttggagagacattgaaaataggagag
gaaacatttgaggacataaatcaggttattgaactatatgtcaatccactggtagttcac
ctgaaagctatgcttaatttccgaaaatttaagaatggcacaaaagctgaggttgatgaa
cggttaaaacatgagaaggacgaatatccaaacaggatagcatatggctttggcatttca
tatgagcatcctggcactttcatcttgtcttacattagaagtacaaatccccatcatgag
tttgtggctatccatccaaaaggattcaagtttaggaagcaaattttcgaaaatattgag
ctgctagtggggtattttcaaaatcatatcaatgataatgttgcgctagcaaaatccagc
ataaaagttggttcagctagtgagtctttgtctggagggtggagaaacaacagtgtagat
cagtctgaatcaaaagcttacaatgataatcggggtggtcgtggtcctcgacgtggccgt
ggagaccgtggacgtggattcggccctaggtctggctctcgtgatgattgtggtgatgat
tcctttgctgcaggcaagagttgggaagtgaggggttctggtgaaggcaatggtggtggg
agacaaggtaggggtaggggcaggggaagaggaagaggaggtagaggaaggcaaggtgat
agaaatgatggtggttttgaacatggtgaggatcgaggaagagggcgaggacgggggcga
ggacgggggagaggaaggtggggaagccaagttagtgatgaccaaggaggaggtggtggt
tggggtggaaataaccatgggagtaggaactattccaatggtgactacagtgatggctac
aagggtagtgattggggacaaggtcctgatgaaggaagaggatggagaggaagccaaggc
aatagccaaggatatggtggttggggtggaaataactcaaacgaagagaggaacgaagag
aacagaggtaatggtggattcggaagtgataacttaggatgggggaagaatgcagatcct
tctggtagtggtggaggcggcggaggtggatggggatggaaaggtggcaaacattggaac
gaagagaacagaggtaatggtggatctggaagtgataacttaggatgggggaagaatgca
gctccttctggtggtggtggtggtggttctgctggtggtggaggtggatggggatggaaa
ggtggtcaaggt
DBGET
integrated database retrieval system