Phaseolus vulgaris (common bean): PHAVU_009G228100g
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Entry
PHAVU_009G228100g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
PHAVU_009G228100g
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PHAVU_009G228100g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_12
TPR_16
TPR_14
TPR_8
TPR_17
TPR_6
TPR_11
TPR_9
TPR_7
ANAPC3
TPR_10
Fis1_TPR_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
18621022
NCBI-ProteinID:
XP_007138670
UniProt:
V7AYN7
LinkDB
All DBs
Position
9:complement(33702500..33715146)
Genome browser
AA seq
1082 aa
AA seq
DB search
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR
QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGVRDNVPALLGQACVEFNRGRYSD
SLDLYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLHLDPENVEALVALAIM
DLRTNEAIGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQVKLGDFKS
ALSNFEKVLEVYPDNCETLKALAHIYVQLGQTDKGQDFIRRATKIDPRDAQAFLELGELL
ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNVGVLQFERGEFELAQQTFKEALGDGIW
QSFINEEKKSSVDAATSTLQFKDMQLFHDFESNGHHVEVPLDKVTVLFNLARLLEQLNES
GTASILYRLILFKYPDYIDAYLRLAAIAKDRNNILLSIELVNDALKVNDKCPNALSMLGE
LELKNDDWVKAKETLRAASDATEGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK
ELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
HVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD
EKKIDTHVGYCTHLLTAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQM
ERRKQEDELKRVQQQEEHFKRVKEQWKSNSHSKRRERSDDEEGGTGEKKKRKSGKKRKKD
KHSKSRYDTEEPEADMMDEQEMEDEEGDVYREEPQTHGEENAHGLLAAAGLEDSDADEEM
GAPSSSIARRRQALSESEDDEPLRRQSSPVRENSGEMQESDGEIRDLDKTNGDDGTDEDK
HY
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtgtacataccggtgcagaattcggaggaggaggttagggttgctctcgat
cagcttccgcgtgacgcctccgacatcctcgacatcctcaaggctgaacaagcccctctc
gatctctggctcatcattgcgagggagtacttcaagcagggaaaaattgatcaatttcgc
cagattttggaggaaggatccagtccagaaattgatgactactatgctgatgttagatat
gagaggattgctatcttaaatgctcttggagcttactatagctaccttggaaaaatagag
acaaaacaacgagaaaaggaggagcattttattttggcaacacagtactacaataaagca
tctaggattgacatgcatgagccctccacttgggttgggaaaggtcagcttttgctagca
aagggtgaagtagaacaggcatctgctgcatttaagattgtgttagatggagtccgtgat
aatgttcctgctcttttgggccaggcatgtgttgagttcaaccgtggacgatactcggat
tcacttgatttgtataagagagcattgcaagtgtttcccaattgcccggcagctgtgaga
cttggcataggtctatgtcgctacaaattaggtcaatttgaaaaggctcagcaggcattt
gagcgagttttacatctagatccagaaaatgttgaggctctagttgcccttgcaataatg
gacttgcgcactaatgaagctattggaatcagaaagggaatggttaaaatgcagagggca
tttgagatatacccatattgtgcaatggctctgaattatcttgcaaatcatttcttcttc
actggtcaacattttttagttgagcaactgactgaaactgcattggctgttaccaatcat
gggccaacaaagtctcactcatactataatttagcacgctcatatcatagcaagggagac
tatgacaaagctggggtgtattacatggcatctgtcaaggaagtcaacaagccccatgaa
tttgtatttccttattatggtctgggacaagtgcaggtaaagttgggagattttaaaagt
gcactctcaaactttgaaaaggtcctggaggtatacccggataattgtgagacattgaag
gcacttgctcatatatatgttcagcttggtcaaactgacaaagggcaggactttattagg
agagctaccaaaattgatccccgggatgcccaggcatttcttgagctgggagaattgtta
attctttccgacacaggagctgcattagatgcattcaaaactgctcgtactctttttaag
aagggaggtcaagaagtaccaattgaattactaaataatgttggtgtgcttcagtttgaa
aggggtgaatttgagcttgctcaacaaacgtttaaggaggctcttggtgatggtatttgg
caatctttcatcaatgaggaaaaaaagtcttccgtagatgctgctacttctactcttcaa
ttcaaggacatgcaattatttcatgactttgaaagcaatggtcatcatgtagaagtgcct
ttggataaagtcactgtactttttaacctggctaggttacttgagcagttaaatgaatct
ggaactgccagcattttgtatcgccttatcttgttcaagtacccagactatattgatgcg
tatttgaggctagctgcaattgcaaaagatcggaacaacattcttttaagcattgaactg
gttaatgatgccttgaaggtgaatgacaagtgtcccaatgcattatctatgcttggtgag
ttggagttgaaaaatgatgattgggtaaaggcaaaagaaacactccgagcagcaagtgat
gcaaccgaaggcaaggactcatatgctactctctctctgggaaactggaactactttgca
gcagttcgcaatgaaaagagaaatcccaagctagaggctactcatttggaaaaggccaaa
gaactttatactagagttctgattcagcattcttctaatttatatgctgccaatggtgct
gcggtagtgttagcagagaaaggccattttgatgtgtcaaaggatatctttacacaggtt
caagaagctgccagtggtagtgtttttgtccagatgcctgatgtttggataaatctggcc
catgtttattttgctcagggaaattttgctttggcagtgaaaatgtaccaaaactgcttg
cggaagttttatcataacacagactctcaaatacttctatatttagctcgtacccattat
gaggctgaacagtggcaagactgtataaaaactctactgagagccatccatttggcaccc
tcaaactatactttaaggtttgatgctggggttgcaatgcaaaagttttcagcatcaaca
ttgcaaaaagcaaagaggactgcggatgaggtgagagcaactgttgctgagctgcaaaat
gctgttcgtgtatttagtcagttgtctgctgcttccaacctacacattcatgggtttgat
gagaagaaaattgacactcatgttggatactgcacccacttacttacggctgctaaagtt
catcttgaagctgctgagcgtgaagagcagcaggtacggcagagacaagaacttgctcgt
caggttgcacttgcagaggaagcccgacgaaaggctgaagagcaaaggaagtttcagatg
gaaaggagaaaacaagaggatgaactaaagcgagtgcaacaacaggaagaacattttaag
cgtgttaaggagcaatggaagagcaacagtcattcaaaacggagagaaagatcagatgat
gaagagggagggaccggtgagaagaagaaaagaaaaagtggaaagaagagaaagaaggat
aagcactcaaaatcacggtatgacacggaggaaccggaagctgatatgatggatgaacaa
gaaatggaggacgaagaaggtgacgtctacagagaggaacctcagactcatggggaggaa
aatgctcatggtcttcttgctgcagcggggcttgaagattccgatgcagatgaggagatg
ggtgcaccatcctcaagcatagcccggcgaaggcaagcattatcggaatctgaagatgat
gaaccattgcgaaggcagtcaagtcctgtaagagaaaattctggtgagatgcaggagagt
gatggagaaatcagggatctggataagacaaatggagatgatggcactgatgaggacaaa
cattattga
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