Ramlibacter terrae: HK414_01370
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Entry
HK414_01370 CDS
T08049
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rtea
Ramlibacter terrae
Pathway
rtea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HK414_01370
03430 Mismatch repair
HK414_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtea03400
]
HK414_01370
Enzymes [BR:
rtea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HK414_01370
DNA repair and recombination proteins [BR:
rtea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HK414_01370
MMR (mismatch excision repair)
Other MMR factors
HK414_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
Viral_helicase1
UvrD_C
T2SSE
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
QJW83350
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All DBs
Position
251502..253439
Genome browser
AA seq
645 aa
AA seq
DB search
MSRRATSRDTDADRELLDCITATPPQSFMVTAGAGSGKTTSLIKALERVIEKHGESMLMR
RQRVACITYTEVAANEIREDVAAENLVHVSTIHSFYWTIASTFQADIKVWVLKGLQEHLD
GLVSKVFGPKVQQKTKDKNKKDQARYKKYLEAASRVPSFRYGVASDYDDGVLGHEDILKL
CNYLLRHKPLFRRVVALNFPFIFIDESQDTFPEVVESFKMLEAQMRDRFCLGFFGDPMQK
IYLRGAGKIVLEDGWKAITKPENFRCAQSILRVANAIRKEGDGLQQVGGLHELVDGVSQP
VEGSARIFVLPNTGDRQAALSQLRAWSAAANEDDGWVKPEDAVKILVIVHRIAAKRLGWA
GIYSALNDQAPTSFKQGLLDGTCWPVRQPGLRCSPLVHAVDCGDEFAAMNILREHCPRLQ
PEGAAGGSVPTVLKEIRGATIALQGMIRDPAATLTTVVAHLRDTQLLTIDPRMERALGLG
AGVGDEAAFDPEAEADGGEEGAGSSPTADLSVAKLLQCPAAELLPYALYVAEGSPFATQH
GVKGAQFDRVLVVMDEEESDYNLYDYEKVLSEKQASADDRKAFETGNDNTWSRTLRLMYV
CCTRAKRGLALAFFVANPEATAAHIVASGIFPKGSVVTQDILDVA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcgccaccagtcgtgacactgatgccgaccgagagctactcgactgcatc
accgccacccctcctcaatccttcatggtgacggctggcgcaggctccggcaagactacg
tcgctcatcaaagcgctggagcgcgttattgagaagcatggtgagagcatgctcatgagg
cgtcagcgagtcgcctgcatcacctataccgaggtcgcggccaacgaaatccgagaagac
gtcgcggctgagaacctcgtgcatgtctcgacaatccacagcttctactggaccatcgcg
agcacgtttcaggctgacatcaaggtatgggtactgaagggccttcaggaacacctagac
gggctcgtcagcaaggtgttcggcccgaaggttcagcagaagactaaggacaagaacaag
aaggatcaagcccggtacaagaaatacctagaggccgcatcccgggtgccctctttccga
tacggggtcgccagcgactacgacgacggagtactcggacacgaagacatcctcaagctc
tgcaactacctgctccgacacaagccgctttttaggcgagtggtcgcactcaacttcccc
ttcatctttatagacgaaagccaggatacgttccccgaagttgtcgagtcgttcaagatg
ttggaagctcagatgcgcgaccgtttctgccttggcttctttggcgatccgatgcagaaa
atttacctgcggggcgcaggaaagattgtgctcgaagatgggtggaaggccatcaccaag
ccagagaacttccgatgtgcgcagagcatcctgcgcgtggctaatgctattcgcaaggaa
ggtgatgggttgcagcaagtcggaggcctccatgagctcgttgatggcgtgtcgcagcct
gttgagggctcagccagaatcttcgtgctcccgaacacgggagaccgtcaggccgcgctt
agccaattgcgtgcgtggagcgcagccgcgaacgaagacgacggctgggtcaagccagaa
gatgctgtcaagattcttgtcatcgttcatcgcatcgccgcaaagcggctgggatgggcc
gggatctactccgcgctcaacgaccaagcgccaacgtcgttcaagcaggggctgctcgat
gggacctgttggccggtgcgtcagcccgggcttcgttgttcccccctggtccacgcggtg
gactgcggagatgagtttgcggcaatgaacatcttgcgtgagcattgcccacgcctccaa
ccggaaggcgccgccggcggcagcgttcctacagttctcaaggaaatccgaggcgcgacg
atcgcactgcaaggcatgattcgagaccctgcggcgaccctgacaacagtcgtcgctcat
ctgcgtgacacgcagttgctgacaatcgatccgcgaatggagcgtgcgctcgggttgggg
gcaggagtcggagatgaggctgccttcgatcctgaagcggaggccgacggcggtgaggag
ggggcaggcagtagtcctaccgcagatttgtctgtggcgaagctgttgcagtgccccgct
gccgagcttctaccatacgcgctgtacgtggcagagggctcaccgttcgcgactcagcat
ggtgtcaaaggagctcagttcgacagagtgctggtggtcatggacgaagaggagagtgac
tacaacctctacgactatgaaaaggttctgagcgagaagcaggccagcgcggatgaccgt
aaggcattcgaaaccggcaatgacaacacatggagtcgtacgctgaggctgatgtatgtg
tgctgcactcgagctaagcgcggccttgcgctggccttcttcgtcgcgaacccagaggca
acagcggctcacatcgtcgcaagcggcatatttcccaagggctcggttgtcacccaagac
atcttggacgtcgcctga
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