KEGG   Toxoplasma gondii: TGME49_305240
Entry
TGME49_305240     CDS       T01093                                 
Name
(RefSeq) XPA binding protein 2 family protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_305240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgo03019]
    TGME49_305240
   03041 Spliceosome [BR:tgo03041]
    TGME49_305240
Messenger RNA biogenesis [BR:tgo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     TGME49_305240
Spliceosome [BR:tgo03041]
 Complex B
  Other components
   Prp19-related factors
    TGME49_305240
 Complex C
    TGME49_305240
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 TPR_16 DUF6614 PUFD
Other DBs
NCBI-GeneID: 7894138
NCBI-ProteinID: XP_002370317
UniProt: A0A125YX83
LinkDB
Position
IX:join(5305770..5305996,5306408..5306726,5307344..5308063,5308463..5308807,5309350..5309457,5309903..5310229,5310553..5310627,5311180..5311305,5311904..5312209,5312630..5312713,5312911..5313174)
AA seq 966 aa
MPPAVATAPDEGASSHHASSSEAVAGGEASVSLDEFNFVTKETDIVYEQELQRDPFQVKV
WVGYLNSKKDAPPYTRFLLYERALRGLPGSYKLWFAYLKERVASLSSHDPLEDSRPFEEA
NVVFERALVHLSRMPKIWMLFVDFLKRQKLLTRTRRAFDRALQSLAVTQHDQVWDRYIQF
VKEAGVVETTLRVYRRCLMLLPEKVEDFIAYLQSPEVGRYDDAARLLAEVVNDESSETQR
TKHELWLELCDLVCKHPREIKSLRAEAVLRSGISRFSDQVGKLWCALASHFVRLGQLEKT
RDVFEEALCGVGTLHDLALVYDAFVQFEESLLAAKMKELEDEENAGPDCAASEDAADRRE
RKRRRKEKKKQQSEEVDFLMTRLEFLTERRPLLVSSCKLRQNPHNVHEWLARVDLFKGDT
AKEVETFSEAVATVDPQQAVGRVSVLWIAFARYYEDRGDLPNARLIFEKATKARVRTVDE
LASIWCEAVEMELRREEWKRALELVRRAISRPRDADPDSAQAKLFRSVKLWSLAADVEEM
TGSPETVRLCYNKMFQLKVITPQLVINYAHFLEEHRFFEESFKVYERGIAAFCWPHLNDL
WLMYLTKFVSRYGSSKLERARELFQQATASVPAQHAKRFFLLYAKLEEEFGLAKHALTIY
QAATKAVPQEEKLDMYLIYIARTTELLGVARTRQIYEEAIENLPEKQARDMCLRYAAVEK
GLGEVDRCRAIYEHCSQMCDPSRDPEFWKAWKDFEVSYGNEETFKDMLRVKRSVQAQYSQ
VHQNVSELADTDAPAAVLNPLAAAEKELKEEEEAKRKLEMREKALEEQLYLKKKKELDDA
EIAQAEEEFKRVQDMRARARMLASLPPDAPFFLAVSGFQGVRPGYIFHRGAQGLGYYLDE
RQVGNDFVSAREKAFITDARPGARSRAEGGDRERHEEVDIDLEGDVPDEVFGNLAAEAKE
MRRNKE
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgccgccagccgtcgcgacggcgcctgacgaaggcgcctcgtctcaccacgcatcctcc
agcgaggccgttgcaggtggagaggcttcggtgtctctcgacgaattcaatttcgtcaca
aaggagacagacattgtctacgaacaagagctgcagagagaccctttccaggtcaaagtc
tgggtcggatacctcaactcaaaaaaagatgcgccgccctatacacggtttctgttgtac
gagcgcgcgctgcgaggactgcctgggagctacaaactgtggttcgcgtacttgaaggag
agagtcgcgtccctgtcgtcccacgatccgcttgaggactcgaggcctttcgaggaggcg
aacgtcgtcttcgaacgcgccctcgtccacctcagtcggatgccgaagatctggatgctc
ttcgtcgacttcctgaagaggcagaaactcctcacgcgcacccgacgcgccttcgacaga
gctctccaaagtctggcggtcactcagcacgaccaagtctgggacagatacatccagttc
gtcaaggaagcgggcgttgtggagacgacgctgcgcgtgtatcgtcgctgtctaatgttg
cttccggagaaagtcgaagacttcatcgcgtatctgcagagccccgaggtgggtcgctac
gacgacgccgcgcggctcttggctgaagtcgtgaacgacgagagttcggagacgcagcga
acgaagcatgaactgtggctggagctctgcgacctcgtgtgcaagcacccgagagagatc
aagagtctccgcgcggaggcagtcctgcggtcaggcatcagccgcttctcagaccaagtg
gggaaactttggtgcgctctcgcctcccatttcgtgcgtctcggccagctggagaagact
cgcgacgtcttcgaggaggccctatgcggtgtgggtactctccacgacctcgccctcgtc
tacgacgcctttgtgcagttcgaagagtcgctgctggcggcgaagatgaaggagctcgag
gacgaggagaacgcaggcccagactgcgccgcctcggaagacgcggcagaccggcgagag
aggaaacgacgcagaaaggagaagaagaagcagcagagcgaggaggtcgacttcctcatg
acgcgcctcgagttcctcacggaacgaaggcctctcctcgtctccagctgcaagctcaga
caaaacccccacaacgttcatgagtggctggccagagtcgacctcttcaagggagatacc
gcaaaggaagttgagaccttcagcgaagcggtggcgacggtggatccgcagcaagcggtg
gggcgagtctcagtgctatggatcgcgtttgcgcgctactacgaagaccgcggggacttg
ccgaacgctcggcttatattcgagaaggcgacgaaggcgcgagtcaggacagtggacgag
ctcgcgagcatctggtgcgaggcggttgaaatggagctgagacgcgaggagtggaagcga
gctctcgagttggtgcggcgcgccatcagtcggcccagagacgccgaccccgacagcgcg
caggcgaagctgtttcgcagcgtgaagctctggagtttggctgcggatgtggaggaaatg
actggctcgccggagaccgttcgtctctgctacaacaagatgtttcagctgaaggtcatc
acgccgcagctggtcatcaactacgcccatttcctcgaggaacatcgtttcttcgaggag
tctttcaaggtgtacgagcgtgggatcgcggcgttctgctggccacacttgaacgacttg
tggctgatgtatttgacaaagtttgtgtctcggtacggcagctcgaagctcgagcgtgct
cgggagcttttccagcaagcgacagcgtctgtccctgcgcagcatgccaaacgtttcttt
ctcctctacgcgaagctcgaggaagaatttgggctggccaagcacgcgctgaccatctac
caagccgccaccaaggctgttccccaggaagagaaactcgacatgtacctcatctacatt
gcgaggacgacggagcttctgggagttgccaggacgcggcaaatttacgaagaagcgatt
gagaatttgcctgaaaaacaggctcgggacatgtgcttgcgatatgcagccgtggagaag
ggcttgggagaagtcgacagatgccgagcgatctacgaacattgctctcagatgtgcgat
cccagcagagatccagaattctggaaggcgtggaaagactttgaggtctcgtacggaaac
gaagagacgttcaaagacatgcttcgcgtcaagagaagcgtgcaggcgcagtacagccaa
gttcatcagaacgtctctgagctggcagatacggacgcgccggctgcggtgctgaatccg
ctcgcggcggccgagaaggagctgaaggaagaagaggaagcaaagcggaagctggaaatg
agggaaaaggctctcgaagagcaactgtatctgaagaagaagaaggaactcgacgacgca
gaaattgcacaggccgaagaagagttcaagcgagttcaagacatgcgagcgcgcgctcgc
atgcttgcatctcttccgccggacgcgcctttcttcttggctgtttctggtttccagggg
gttcgtcctggctacatcttccacagaggagcgcaaggcctggggtactacctggatgag
agacaagttggaaacgacttcgtttcggcgcgggagaaagccttcatcaccgacgctcgg
ccgggcgcgagaagccgcgcagaagggggagacagggagcgacacgaagaagtagacatc
gatctggagggcgacgttcccgatgaggtgttcggcaatctcgccgctgaagcaaaggaa
atgcgcagaaacaaagagtga

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