Yarrowia lipolytica: YALI0E13299g
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Entry
YALI0E13299g CDS
T01033
Name
(RefSeq) YALI0E13299p
KO
K12849
pre-mRNA-splicing factor 38A
Organism
yli
Yarrowia lipolytica
Pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YALI0E13299g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
yli03041
]
YALI0E13299g
Spliceosome [BR:
yli03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
YALI0E13299g
Complex C
U4/U6.U5 tri-SnRNP related factors
YALI0E13299g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
2912025
NCBI-ProteinID:
XP_503896
UniProt:
Q6C616
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Position
E:complement(1604934..1605581)
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AA seq
215 aa
AA seq
DB search
MDTYITDRGMVHGALSIHGINPALLIEKIIRERIFETLYWKELCFNLNAATLCDRAATLT
AIGGQYANQKPTPFLCLVFKLLQIQPSHDIIMEYLNQKEFKYLRAVAAFYIRLAYPPVKI
YTLLEPLLGDYRKLRFRNMGGVTLTYMDQFIDDLLHEERVCDIALPRLPKRLTLEDAEQL
EPREPLIDVSESESEESEEESQDEESEEEGEEDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggacacctatatcaccgacaggggcatggtgcacggcgcactgtcgattcatggaata
aacccggcgctactgattgaaaagatcatcagagaacgcatctttgaaacactgtactgg
aaagagctgtgtttcaatctcaatgccgccactctgtgtgatcgagcagcaacattgacg
gccattggaggccagtatgcgaatcaaaaaccgacgccgtttttgtgtctggtcttcaaa
ctgctccagatccagcccagccacgacattatcatggagtacttgaaccagaaggagttc
aagtacctgagagcggtggcagccttctatattcggctggcatacccccccgtgaaaata
tacactcttttggaaccacttttaggagactaccggaaactgcggttcagaaacatgggt
ggcgtgactctgacgtacatggatcagttcattgatgatctgttacacgaggagcgagtg
tgtgatattgcattgcctcgactgcctaaacgactgaccctcgaagatgctgagcagttg
gagcccagagaacctcttattgacgttagtgagagcgaaagcgaggagagtgaggaggag
agtcaagatgaggaaagtgaagaggaaggggaagaagatgatgagtag
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