KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00003 Gluconeogenesis, oxaloacetate => fructose-6P
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA
M00009 Citrate cycle (TCA cycle, Krebs cycle)
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00007 Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
M00005 PRPP biosynthesis, ribose-5P => PRPP
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
ATP synthesis
M00149 Succinate dehydrogenase, prokaryotes
M00151 Cytochrome bc1 complex respiratory unit
M00153 Cytochrome bd ubiquinol oxidase
M00156 Cytochrome c oxidase, cbb3-type
M00157 F-type ATPase, prokaryotes and chloroplasts
Lipid metabolism
Fatty acid metabolism
M00083 Fatty acid biosynthesis, elongation
M00086 beta-Oxidation, acyl-CoA synthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine
M00018 Threonine biosynthesis, aspartate => homoserine => threonine
M00621 Glycine cleavage system
M00555 Betaine biosynthesis, choline => betaine
Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine
Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine
M00844 Arginine biosynthesis, ornithine => arginine
M00015 Proline biosynthesis, glutamate => proline
M00970 Proline degradation, proline => glutamate
Histidine metabolism
M00026 Histidine biosynthesis, PRPP => histidine
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
M00023 Tryptophan biosynthesis, chorismate => tryptophan
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine
Other amino acid metabolism
M00118 Glutathione biosynthesis, glutamate => glutathione
Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc
M00996 UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc
M00063 CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00120 Coenzyme A biosynthesis, pantothenate => CoA
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Xenobiotics biodegradation
Aromatics degradation
M00551 Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
M00568 Catechol ortho-cleavage, catechol => 3-oxoadipate
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