KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plh00010 plh00020 plh00620 plh01200 plh01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:plh00020 plh01200 plh01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:plh00020 plh01200 plh01210 plh01230 plh01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:plh00020 plh01200 plh01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:plh00030 plh01200 plh01100 plh01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:plh00030 plh01200 plh01100 plh01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:plh00030 plh01200 plh01230 plh01100 plh01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:plh00030 plh00230 plh01200 plh01230 plh01100]

Other carbohydrate metabolism
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:plh00052 plh01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:plh00500 plh01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:plh00500 plh01100 plh01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:plh00520 plh01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:plh00520 plh00052 plh01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:plh00280 plh00630 plh00640 plh01200 plh01100]

Energy metabolism
Carbon fixation
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:plh00430 plh00620 plh01200 plh01100 plh01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:plh00920 plh01100 plh01120]

Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH:plh00190]
M00155 Cytochrome c oxidase, prokaryotes [PATH:plh00190]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:plh00190]

Lipid metabolism
Fatty acid metabolism
M00083 Fatty acid biosynthesis, elongation [PATH:plh00061 plh01212 plh01100]

Sterol biosynthesis
Lipid metabolism
M00098 Acylglycerol degradation [PATH:plh00561 plh01100]
M00091 Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:plh00564 plh01100]

Nucleotide metabolism
Purine metabolism
M00048 Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH:plh00230 plh01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:plh00230 plh01100]
M00050 Guanine ribonucleotide biosynthesis IMP => GDP,GTP [PATH:plh00230 plh01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:plh00240 plh01100]

Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:plh00270 plh00920 plh01200 plh01230 plh01100 plh01110]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:plh00290 plh00770 plh01210 plh01230 plh01100 plh01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:plh00290 plh01230 plh01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:plh00290 plh01210 plh01230 plh01100 plh01110]

Lysine metabolism
M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:plh00300 plh01230 plh01100 plh01110]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:plh00220 plh01210 plh01230 plh01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:plh00220 plh01230 plh01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:plh00330 plh01230 plh01100]

Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:plh00400 plh01230 plh01100 plh01110]

Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00866 KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type [PATH:plh00540 plh01100]
M00063 CMP-KDO biosynthesis [PATH:plh00540 plh01100]

Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00115 NAD biosynthesis, aspartate => NAD [PATH:plh00760 plh01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:plh00770 plh01100 plh01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:plh00770 plh01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:plh00790 plh01100]
M00140 C1-unit interconversion, prokaryotes [PATH:plh00670 plh01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:plh00860 plh01100 plh01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
M00793 dTDP-L-rhamnose biosynthesis [PATH:plh00521 plh00523 plh01100 plh01110]

Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:plh01501]

Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation