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Genome information| Entry | T01151 |
| Org code | afn |
| Name | Acidaminococcus fermentans DSM 20731 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 591001 |
| Lineage | Bacteria; Bacillati; Bacillota; Negativicutes; Acidaminococcales; Acidaminococcaceae; Acidaminococcus; Acidaminococcus fermentans |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_000025305.1 Complete Genome)
BioProject: 33685 |
| Original DB | JGI |
| Keywords | Animal pathogen, Human pathogen |
| Comment | Anaerobic, nonsporulating, nonmotile, chemoorganotrophic and mesophilic coccus.
Thrives mainly by glutamate fermentation via the 2-hydroxyglutarate pathway in the intestinal tract of homeothermic animals, utilizing glutamate, citrate, and trans-aconitate as sole energy sources, in the presence of sodium.
Ammonia, acetate, butyrate, and hydrogen are the main end products of growth.
Isolated from a pig alimentary tract.
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| Chromosome | Circular |
| Sequence | GB: CP001859 |
| Length | 2329769 |
| Statistics | Number of nucleotides: 2329769
Number of protein genes: 2026
Number of RNA genes: 82
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| Created | 2010 |
| Reference | PMID: 21304687 |
| Authors | Chang YJ, Pukall R, Saunders E, Lapidus A, Copeland A, Nolan M, Glavina Del Rio T, Lucas S, Chen F, Tice H, et al. |
| Title | Complete genome sequence of Acidaminococcus fermentans type strain (VR4). |
| Journal | Stand Genomic Sci 3:1-14 (2010)
DOI: 10.4056/sigs.1002553 |
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Acidaminococcus fermentans