| Entry | T05042 |
| Org code | amex |
| Name | Astyanax mexicanus (Mexican tetra) |
| Annotation | yes |
| Taxonomy | TAX: 7994 |
| Lineage | Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysi; Characiphysae; Characiformes; Characoidei; Acestrorhamphidae; Acestrorhamphinae; Astyanax |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612] |
| Data source | RefSeq Assembly: GCF_023375975.1 (Chromosome)
BioProject: 853366 |
| Chromosome | 1 (RS: NC_064408)
2 (RS: NC_064409)
3 (RS: NC_064410)
4 (RS: NC_064411)
5 (RS: NC_064412)
6 (RS: NC_064413)
7 (RS: NC_064414)
8 (RS: NC_064415)
9 (RS: NC_064416)
10 (RS: NC_064417)
11 (RS: NC_064418)
12 (RS: NC_064419)
13 (RS: NC_064420)
14 (RS: NC_064421)
15 (RS: NC_064422)
16 (RS: NC_064423)
17 (RS: NC_064424)
18 (RS: NC_064425)
19 (RS: NC_064426)
20 (RS: NC_064427)
21 (RS: NC_064428)
22 (RS: NC_064429)
23 (RS: NC_064430)
24 (RS: NC_064431)
25 (RS: NC_064432) |
| Statistics | Number of protein genes: 26736
Number of RNA genes: 10871
|
| Created | 2017 |
| Reference | PMID: 38014157 |
| Authors | Warren WC, Rice ES, Maggs X, Roback E, Keene A, Martin F, Ogeh D, Haggerty L, Carroll RA, McGaugh S, Rohner N |
| Title | Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery. |
| Journal | bioRxiv 2023.11.16.567450 (2023)
DOI: 10.1101/2023.11.16.567450 |
| Reference | PMID: 25329095 |
| Authors | McGaugh SE, Gross JB, Aken B, Blin M, Borowsky R, Chalopin D, Hinaux H, Jeffery WR, Keene A, Ma L, et al. |
| Title | The cavefish genome reveals candidate genes for eye loss. |
| Journal | Nat Commun 5:5307 (2014)
DOI: 10.1038/ncomms6307 |
Astyanax mexicanus (Mexican tetra)