| Entry | T09098 |
| Org code | clit |
| Name | Chondrinema litorale WSW3-B12 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 2994555 |
| Lineage | Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Cytophagia; Cytophagales; Flammeovirgaceae; Chondrinema |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_026250525.1 Complete Genome)
BioProject: 901263 |
| Comment | Isolated from the red alga genus Chondrus collected in the West Sea, Byeonsan, Republic of Korea (35 deg 40 min 53.76 sec N 126 deg 31 min 51.96 sec E) in late autumn, 2020.
|
| Chromosome | Circular |
| Sequence | GB: CP111043 |
| Length | 4938441 |
| Plasmid | unnamed2; Circular |
| Sequence | GB: CP111044 |
| Length | 641076 |
| Plasmid | unnamed3; Circular |
| Sequence | GB: CP111045 |
| Length | 524470 |
| Plasmid | unnamed4 |
| Sequence | GB: CP111046 |
| Length | 338635 |
| Plasmid | unnamed5; Circular |
| Sequence | GB: CP111047 |
| Length | 309758 |
| Plasmid | unnamed6; Circular |
| Sequence | GB: CP111048 |
| Length | 304534 |
| Plasmid | unnamed7; Circular |
| Sequence | GB: CP111049 |
| Length | 267758 |
| Plasmid | unnamed8; Circular |
| Sequence | GB: CP111050 |
| Length | 238141 |
| Plasmid | unnamed9; Circular |
| Sequence | GB: CP111051 |
| Length | 231362 |
| Plasmid | unnamed10; Circular |
| Sequence | GB: CP111052 |
| Length | 223690 |
| Plasmid | unnamed11; Circular |
| Sequence | GB: CP111053 |
| Length | 218105 |
| Plasmid | unnamed12; Circular |
| Sequence | GB: CP111054 |
| Length | 189370 |
| Plasmid | unnamed13; Circular |
| Sequence | GB: CP111055 |
| Length | 176344 |
| Plasmid | unnamed14; Circular |
| Sequence | GB: CP111056 |
| Length | 171695 |
| Plasmid | unnamed15; Circular |
| Sequence | GB: CP111057 |
| Length | 162594 |
| Plasmid | unnamed16; Circular |
| Sequence | GB: CP111058 |
| Length | 152552 |
| Plasmid | unnamed17; Circular |
| Sequence | GB: CP111059 |
| Length | 146538 |
| Plasmid | unnamed18; Circular |
| Sequence | GB: CP111060 |
| Length | 139744 |
| Plasmid | unnamed19; Circular |
| Sequence | GB: CP111061 |
| Length | 120999 |
| Plasmid | unnamed20; Circular |
| Sequence | GB: CP111062 |
| Length | 105716 |
| Plasmid | unnamed21; Circular |
| Sequence | GB: CP111063 |
| Length | 100318 |
| Plasmid | unnamed22; Circular |
| Sequence | GB: CP111064 |
| Length | 96629 |
| Plasmid | unnamed23 |
| Sequence | GB: CP111065 |
| Length | 86051 |
| Plasmid | unnamed24; Circular |
| Sequence | GB: CP111066 |
| Length | 74661 |
| Plasmid | unnamed25; Circular |
| Sequence | GB: CP111067 |
| Length | 74085 |
| Plasmid | unnamed26; Circular |
| Sequence | GB: CP111068 |
| Length | 45503 |
| Plasmid | unnamed27 |
| Sequence | GB: CP111069 |
| Length | 37472 |
| Plasmid | unnamed28; Circular |
| Sequence | GB: CP111070 |
| Length | 15446 |
| Plasmid | unnamed29; Circular |
| Sequence | GB: CP111071 |
| Length | 10609 |
| Statistics | Number of nucleotides: 10142296
Number of protein genes: 8068
Number of RNA genes: 62
|
| Created | 2023 |
| Reference | |
| Authors | Muhammad N, Avila F, Lee YJ, Han HL, Kim KH, Kim SG. |
| Title | Chondrinema litorale gen. nov., sp. nov., of the phylum Bacteroidota, carrying multiple megaplasmids isolated from a tidal flat in the West Sea, Korea. |
| Journal | Front. Mar. Sci. 10 (2023)
DOI: 10.3389/fmars.2023.1186809 |
Chondrinema litorale