Sylvia atricapilla (blackcap)
Genome info
Pathway map
Brite hierarchy
Module
Genome browser
Search genes:
Genome information
Entry
T10263
Org code
sati
Name
Sylvia atricapilla (blackcap)
Annotation
yes
Taxonomy
TAX:
48155
Lineage
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviinae; Sylvia
Brite
KEGG organisms [BR:
br08601
]
KEGG organisms in the NCBI taxonomy [BR:
br08610
]
KEGG organisms in taxonomic ranks [BR:
br08611
]
KEGG organisms: animals [BR:
br08612
]
Data source
RefSeq Assembly:
GCF_009819655.1
(Chromosome)
BioProject:
1125396
Chromosome
1 (RS:
NC_089140
)
2 (RS:
NC_089141
)
3 (RS:
NC_089142
)
4 (RS:
NC_089143
)
5 (RS:
NC_089144
)
6 (RS:
NC_089145
)
7 (RS:
NC_089146
)
8 (RS:
NC_089147
)
9 (RS:
NC_089148
)
10 (RS:
NC_089149
)
11 (RS:
NC_089150
)
12 (RS:
NC_089151
)
13 (RS:
NC_089152
)
14 (RS:
NC_089153
)
15 (RS:
NC_089154
)
16 (RS:
NC_089155
)
17 (RS:
NC_089156
)
18 (RS:
NC_089157
)
19 (RS:
NC_089158
)
20 (RS:
NC_089159
)
21 (RS:
NC_089160
)
22 (RS:
NC_089161
)
23 (RS:
NC_089162
)
24 (RS:
NC_089163
)
25 (RS:
NC_089164
)
26 (RS:
NC_089165
)
27 (RS:
NC_089166
)
28 (RS:
NC_089167
)
29 (RS:
NC_089168
)
30 (RS:
NC_089169
)
31 (RS:
NC_089170
)
32 (RS:
NC_089171
)
33 (RS:
NC_089172
)
W (RS:
NC_089173
)
Z (RS:
NC_089174
)
MT; Circular (RS:
NC_010228
)
Statistics
Number of protein genes: 15521
Number of RNA genes: 267
Created
2024
Reference
PMID:
37777595
Authors
Bours A, Pruisscher P, Bascon-Cardozo K, Odenthal-Hesse L, Liedvogel M
Title
The blackcap (Sylvia atricapilla) genome reveals a recent accumulation of LTR retrotransposons.
Journal
Sci Rep 13:16471 (2023)
DOI:
10.1038/s41598-023-43090-1
Reference
PMID:
18178969
Authors
Singh TR, Shneor O, Huchon D
Title
Bird mitochondrial gene order: insight from 3 warbler mitochondrial genomes.
Journal
Mol Biol Evol 25:475-7 (2008)
DOI:
10.1093/molbev/msn003
Sylvia atricapilla (blackcap) Sylvia atricapilla (blackcap)