Aphelocoma coerulescens (scrub jay)
Genome info
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Genome information
Entry
T10543
Org code
acoe
Name
Aphelocoma coerulescens (scrub jay)
Annotation
yes
Taxonomy
TAX:
39617
Lineage
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Aphelocoma
Brite
KEGG organisms [BR:
br08601
]
KEGG organisms in the NCBI taxonomy [BR:
br08610
]
KEGG organisms in taxonomic ranks [BR:
br08611
]
KEGG organisms: animals [BR:
br08612
]
Data source
RefSeq Assembly:
GCF_041296385.1
(Chromosome)
BioProject:
1168067
Chromosome
1 (RS:
NC_091013
)
1A (RS:
NC_091014
)
2 (RS:
NC_091015
)
3 (RS:
NC_091016
)
4 (RS:
NC_091017
)
4A (RS:
NC_091018
)
5 (RS:
NC_091019
)
6 (RS:
NC_091020
)
7 (RS:
NC_091021
)
8 (RS:
NC_091022
)
9 (RS:
NC_091023
)
10 (RS:
NC_091024
)
11 (RS:
NC_091025
)
12 (RS:
NC_091026
)
13 (RS:
NC_091027
)
14 (RS:
NC_091028
)
15 (RS:
NC_091029
)
17 (RS:
NC_091030
)
18 (RS:
NC_091031
)
19 (RS:
NC_091032
)
20 (RS:
NC_091033
)
21 (RS:
NC_091034
)
22 (RS:
NC_091035
)
23 (RS:
NC_091036
)
24 (RS:
NC_091037
)
25 (RS:
NC_091038
)
26 (RS:
NC_091039
)
27 (RS:
NC_091040
)
28 (RS:
NC_091041
)
29 (RS:
NC_091042
)
30 (RS:
NC_091043
)
31 (RS:
NC_091044
)
34 (RS:
NC_091045
)
MT; Circular (RS:
NC_051467
)
Statistics
Number of protein genes: 17513
Number of RNA genes: 1682
Created
2024
Reference
PMID:
39328063
Authors
Romero FG, Beaudry FEG, Hovmand Warner E, Nguyen TN, Fitzpatrick JW, Chen N
Title
A new high-quality genome assembly and annotation for the threatened Florida Scrub-Jay (Aphelocoma coerulescens).
Journal
G3 (Bethesda) jkae232 (2024)
DOI:
10.1093/g3journal/jkae232
Aphelocoma coerulescens (scrub jay) Aphelocoma coerulescens (scrub jay)