| Entry | T05910 |
| Org code | mcal |
| Name | Mus caroli (Ryukyu mouse) |
| Annotation | yes |
| Taxonomy | TAX: 10089 |
| Lineage | Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612] |
| Data source | RefSeq Assembly: GCF_900094665.2 (Chromosome)
BioProject: 387030 |
| Chromosome | 1 (RS: NC_034570)
2 (RS: NC_034571)
3 (RS: NC_034572)
4 (RS: NC_034573)
5 (RS: NC_034574)
6 (RS: NC_034575)
7 (RS: NC_034576)
8 (RS: NC_034577)
9 (RS: NC_034578)
10 (RS: NC_034579)
11 (RS: NC_034580)
12 (RS: NC_034581)
13 (RS: NC_034582)
14 (RS: NC_034583)
15 (RS: NC_034584)
16 (RS: NC_034585)
17 (RS: NC_034586)
18 (RS: NC_034587)
19 (RS: NC_034588)
X (RS: NC_034589)
MT; Circular (RS: NC_025268) |
| Statistics | Number of protein genes: 21002
Number of RNA genes: 2129
|
| Created | 2019 |
| Reference | PMID: 29563166 |
| Authors | Thybert D, Roller M, Navarro FCP, Fiddes I, Streeter I, Feig C, Martin-Galvez D, Kolmogorov M, Janousek V, Akanni W, et al. |
| Title | Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes. |
| Journal | Genome Res 28:448-459 (2018)
DOI: 10.1101/gr.234096.117 |
| Reference | PMID: 25275614 |
| Authors | Tsangaras K, Wales N, Sicheritz-Ponten T, Rasmussen S, Michaux J, Ishida Y, Morand S, Kampmann ML, Gilbert MT, Greenwood AD |
| Title | Hybridization capture using short PCR products enriches small genomes by capturing flanking sequences (CapFlank). |
| Journal | PLoS One 9:e109101 (2014)
DOI: 10.1371/journal.pone.0109101 |
Mus caroli (Ryukyu mouse)