SSDB Best Search Result

Entry:rsd:TGRD_134 (153 a.a.)
Name:SsrA-binding protein SmpB
KO:K03664 SsrA-binding protein

Search Result : 258 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
bsu:BSU33600 SsrA-binding protein                       K03664     156      425     0.473      146     
chy:CHY_0290 SsrA-binding protein                       K03664     149      423     0.486      146     
tth:TT_C0546 ssrA-binding protein                       K03664     144      423     0.481      135     
efa:EF2616 SsrA-binding protein                         K03664     154      423     0.465      144     
cth:Cthe_2748 SsrA-binding protein                      K03664     154      422     0.466      146     
tde:TDE_1464 SsrA-binding protein                       K03664     154      412     0.428      145     
aae:aq_287 small protein B                              K03664     157      412     0.476      145     
gme:Gmet_1646 SsrA-binding protein                      K03664     153      405     0.463      147     
bpf:BpOF4_05245 SsrA-binding protein                    K03664     155      402     0.444      144     
dsy:DSY4835 hypothetical protein                        K03664     156      399     0.411      146     
vg:18480037 Staphylococcus phage StauST398-5; SsrA-bind K03664     154      398     0.428      152     
cst:CLOST_0657 trans-translation protein                K03664     151      398     0.455      145     
llm:llmg_1902 SmpB protein                              K03664     155      398     0.441      152     
sao:SAOUHSC_00804 SsrA-binding protein                  K03664     154      398     0.428      152     
sau:SA0736 ssrA-binding protein                         K03664     154      397     0.428      152     
lmo:lmo2448 SsrA-binding protein                        K03664     154      397     0.418      146     
lla:L160560 tmRNA-binding protein SmpB                  K03664     155      397     0.441      152     
lin:lin2542 conserved hypothetical protein              K03664     154      397     0.418      146     
gtn:GTNG_2997 tmRNA-binding protein                     K03664     161      396     0.432      146     
bce:BC5128 SsrA-binding protein                         K03664     155      395     0.425      146     
tel:tll1927 ssrA-binding protein                        K03664     152      394     0.444      144     
spn:SP_0976 SsrA-binding protein                        K03664     155      393     0.417      144     
cte:CT0564 smpB family protein                          K03664     157      393     0.449      138     
bha:BH3552 small protein B                              K03664     157      392     0.431      144     
sgr:SGR_4561 putative small protein B                   K03664     162      391     0.434      145     
btk:BT9727_4806 ssrA-binding protein                    K03664     155      389     0.418      146     
ban:BA_5332 SsrA-binding protein                        K03664     155      389     0.418      146     
spr:spr0879 Small protein B                             K03664     155      389     0.417      144     
mta:Moth_0275 SsrA-binding protein                      K03664     155      388     0.424      144     
gsu:GSU1709 SsrA-binding protein                        K03664     153      387     0.442      147     
bmf:BAB1_0667 SmpB protein                              K03664     158      386     0.414      145     
smu:SMU_1606 putative SsrA-binding protein-like protein K03664     155      386     0.434      143     
bms:BR0647 SsrA-binding protein                         K03664     158      386     0.414      145     
sco:SCO2966 small protein B homologue                   K03664     159      386     0.421      145     
bme:BMEI1300 small protein b                            K03664     158      386     0.414      145     
mar:MAE_44420 SsrA-binding protein                      K03664     154      385     0.442      147     
cau:Caur_3317 SsrA-binding protein                      K03664     160      385     0.441      143     
fnu:FN0609 Small protein B                              K03664     148      385     0.424      144     
bfr:BF3200 SsrA-binding protein                         K03664     150      384     0.418      141     
bth:BT_0179 SsrA-binding protein                        K03664     150      384     0.393      150     
sgu:SGLAU_13475 SsrA-binding protein                    K03664     159      383     0.421      145     
wsu:WS0883 SMALL PROTEIN B HOMOLOG                      K03664     151      383     0.414      145     
dde:Dde_1088 SsrA-binding protein                       K03664     155      382     0.409      154     
sct:SCAT_1988 tmRNA-binding protein                     K03664     159      381     0.428      145     
stp:Strop_0984 SsrA-binding protein                     K03664     159      381     0.421      145     
tte:TTE0985 tmRNA-binding protein                       K03664     158      381     0.425      146     
spy:SPy_0504 conserved hypothetical protein             K03664     155      381     0.427      143     
ccyc:SCMU_25800 SsrA-binding protein                    K03664     156      380     0.438      146     
ttm:Tthe_1210 SsrA-binding protein                      K03664     155      380     0.432      146     
ser:SERP0451 SsrA-binding protein                       K03664     156      380     0.420      143     
lba:Lebu_2001 SsrA-binding protein                      K03664     152      379     0.444      142     
lcb:LCABL_11400 SsrA-binding protein                    K03664     157      379     0.430      142     
sno:Snov_1624 SsrA-binding protein                      K03664     157      378     0.421      145     
syf:Synpcc7942_1795 SsrA-binding protein                K03664     154      377     0.417      144     
syc:syc2298_d tmRNA binding protein SmpB                K03664     154      377     0.417      144     
det:DET1506 SsrA-binding protein                        K03664     172      376     0.441      145     
ksk:KSE_28850 putative SsrA-binding protein             K03664     160      375     0.434      145     
hth:HTH_1602 SsrA-binding protein                       K03664     158      375     0.422      147     
cdf:CD630_31570 SsrA-binding protein                    K03664     163      375     0.438      146     
cac:CA_C0716 TmRNA-binding protein SmpB                 K03664     155      375     0.418      146     
tex:Teth514_1354 SsrA-binding protein                   K03664     156      374     0.418      146     
bvu:BVU_2527 SsrA-binding protein                       K03664     150      374     0.400      150     
sen:SACE_1108 SsrA-binding protein                      K03664     158      374     0.414      145     
cgl:Cgl0804 tmRNA-binding protein                       K03664     164      374     0.406      143     
cpn:CPn_0337 Small Protein B                            K03664     151      374     0.425      146     
cpe:CPE1295 probable SSRA-binding protein               K03664     156      373     0.421      145     
bhe:BH05010 SSRA-binding protein                        K03664     158      372     0.407      145     
amd:AMED_1253 SsrA-binding protein                      K03664     160      371     0.414      145     
ljo:LJ_0878 SsrA-binding protein                        K03664     151      371     0.401      152     
cbo:CBO0234 SsrA-binding protein                        K03664     156      370     0.441      152     
ava:Ava_2325 SsrA-binding protein                       K03664     155      370     0.417      144     
pjd:Pjdr2_0185 SsrA-binding protein                     K03664     160      369     0.396      144     
syp:SYNPCC7002_A1351 SsrA-binding protein               K03664     155      369     0.428      145     
ftu:FTT_1186 SsrA (tmRNA)-binding protein               K03664     157      368     0.438      146     
wol:WD_0767 SsrA-binding protein                        K03664     149      368     0.403      144     
rso:RSc1424 probable ssra-binding protein.              K03664     148      368     0.413      143     
sro:Sros_1455 SmpB protein                              K03664     155      367     0.421      145     
sma:SAVERM_5107 putative small protein B                K03664     177      367     0.411      146     
lil:LA_1302 SsrA-binding protein                        K03664     160      367     0.412      153     
ana:alr5070 tmRNA-binding protein                       K03664     155      367     0.417      144     
anb:ANA_C11001 SsrA-binding protein SmpB                K03664     156      366     0.396      144     
pgi:PG_0502 SsrA-binding protein                        K03664     153      366     0.397      151     
syn:slr1639 small protein                               K03664     154      366     0.421      145     
rco:RC0596 small protein B homolog                      K03664     152      366     0.407      145     
ase:ACPL_1082 SsrA-binding protein                      K03664     158      365     0.407      145     
dds:Ddes_1797 SsrA-binding protein                      K03664     151      365     0.431      144     
npu:Npun_F0451 SsrA-binding protein                     K03664     155      365     0.417      144     
cpy:Cphy_2865 SsrA-binding protein                      K03664     154      365     0.390      146     
msm:MSMEG_2091 SsrA-binding protein                     K03664     161      365     0.393      145     
ral:Rumal_0945 SsrA-binding protein                     K03664     157      364     0.428      145     
ctb:CTL0332 SsrA-binding protein                        K03664     151      364     0.411      146     
rha:RHA1_ro06409 SsrA-binding protein                   K03664     157      364     0.411      146     
ret:RHE_CH01382 ssrA-binding (tmRNA-binding) protein    K03664     159      364     0.375      144     
eba:ebB233 tmRNA-binding protein                        K03664     148      364     0.427      143     
mlo:mlr7747 SSRA-binding protein                        K03664     159      364     0.375      144     
rer:RER_23120 SsrA-binding protein                      K03664     157      363     0.404      146     
reh:H16_A2035 tmRNA-binding protein small potein B      K03664     150      363     0.413      143     
nca:Noca_1272 SsrA-binding protein                      K03664     159      362     0.430      142     
ctr:CT_076 SsrA-binding protein                         K03664     151      362     0.411      146     
phe:Phep_1552 SsrA-binding protein                      K03664     149      360     0.354      147     
mmi:MMAR_1532 ssRNA-binding protein SmpB                K03664     168      360     0.377      146     
rle:RL1503 putative RNA binding protein                 K03664     151      360     0.374      147     
sme:SMc02405 Conserved hypothetical protein             K03664     159      360     0.372      145     
mul:MUL_2407 ssRNA-binding protein SmpB                 K03664     168      359     0.377      146     
zga:ZOBELLIA_4749 SsrA-binding protein                  K03664     154      356     0.409      149     
reu:Reut_A1861 SsrA-binding protein                     K03664     150      356     0.399      143     
rpa:TX73_013930 SsrA-binding protein SmpB               K03664     157      356     0.410      144     
mle:ML0671 putative SsrA-binding protein                K03664     160      356     0.370      146     
atu:Atu1025 SSRA-binding protein                        K03664     160      356     0.382      144     
cdi:DIP0750 SsrA-binding protein                        K03664     163      355     0.399      143     
gpo:GPOL_c33020 ssrA-binding protein SmpB               K03664     157      354     0.390      146     
mva:Mvan_1916 SsrA-binding protein                      K03664     165      354     0.379      145     
lpl:lp_0799 SSRA RNA binding protein                    K03664     156      354     0.387      142     
oih:OB2426 ssrA-binding protein                         K03664     155      354     0.414      145     
bxe:Bxe_A1702 SsrA-binding protein                      K03664     148      353     0.431      144     
rpr:RP430 SMALL PROTEIN B HOMOLOG (smpB)                K03664     152      353     0.400      145     
mtu:Rv3100c SsrA-binding protein                        K03664     160      353     0.370      146     
mtc:MT3184 small protein B                              K03664     160      353     0.370      146     
bma:BMA1532 SsrA-binding protein                        K03664     148      351     0.431      144     
bps:BPSL2137 SSRA-binding protein                       K03664     148      351     0.431      144     
bja:bll5070 tmRNA-binding protein                       K03664     157      351     0.403      144     
azc:AZC_1244 SsrA-binding protein                       K03664     160      350     0.354      147     
nme:NMB1526 small major protein B                       K03664     148      350     0.394      142     
afn:Acfer_0975 SsrA-binding protein                     K03664     154      349     0.421      145     
ngo:NGO_0986 SsrA-binding protein                       K03664     148      349     0.394      142     
ooe:OEOE_1438 SsrA-binding protein                      K03664     155      348     0.401      142     
sat:SYN_02189 ssrA-binding protein                      K03664     158      348     0.421      145     
nfa:NFA_44800 putative small protein B                  K03664     160      348     0.384      146     
mea:Mex_1p3404 trans-translation protein, binds tmRNA a K03664     157      347     0.366      145     
pdi:BDI_0413 SsrA-binding protein                       K03664     153      347     0.355      141     
gvi:gll1494 ORF_ID:gll1494                              K03664     152      345     0.411      146     
rcp:RCAP_rcc03380 ssrA-binding protein                  K03664     157      344     0.389      144     
pma:Pro_1776 tmRNA-binding protein                      K03664     165      344     0.413      143     
pde:Pden_0632 SsrA-binding protein                      K03664     156      343     0.375      144     
dvu:DVU_0828 SsrA-binding protein                       K03664     154      343     0.397      146     
hpy:HP_1444 small protein (smpB)                        K03664     152      343     0.366      142     
ssy:SLG_15170 SsrA-binding protein                      K03664     160      342     0.384      146     
zmo:ZMO0721 SsrA-binding protein                        K03664     160      341     0.390      146     
alv:Alvin_2433 SsrA-binding protein                     K03664     159      340     0.420      143     
sml:Smlt1983 putative SsrA-binding protein              K03664     167      340     0.399      143     
swi:Swit_0516 SsrA-binding protein                      K03664     160      340     0.377      146     
dra:DR_1468 small protein B                             K03664     160      340     0.372      145     
hpj:jhp_1337 putative                                   K03664     152      339     0.359      142     
elm:ELI_2911 SsrA-binding protein                       K03664     152      338     0.403      144     
rsp:RSP_0883 SsrA-binding protein                       K03664     157      338     0.389      144     
psb:Psyr_4203 SsrA-binding protein                      K03664     160      338     0.406      143     
mca:MCA2620 SsrA-binding protein                        K03664     157      338     0.408      142     
pst:PSPTO_4515 SsrA-binding protein                     K03664     160      335     0.399      143     
avn:Avin_43050 SsrA-binding protein                     K03664     160      334     0.408      142     
bpe:BP1442 SsrA-binding protein                         K03664     155      334     0.399      143     
afr:AFE_0277 SsrA-binding protein                       K03664     153      333     0.392      143     
tfu:Tfu_2476 SsrA-binding protein                       K03664     160      333     0.375      144     
xau:Xaut_3832 SsrA-binding protein                      K03664     158      331     0.359      145     
neu:NE0430 SmpB protein                                 K03664     151      331     0.406      143     
bbu:BB_0033 SsrA-binding protein                        K03664     150      331     0.403      144     
sjp:SJA_C1-32850 SsrA-binding protein                   K03664     160      330     0.363      146     
mab:MAB_3473c SsrA-binding protein                      K03664     159      330     0.349      146     
fps:FP1884 SsrA-binding protein                         K03664     150      328     0.374      139     
vpa:VP0644 small protein B                              K03664     161      327     0.392      143     
pae:PA4768 SsrA-binding protein                         K03664     159      326     0.392      143     
lpn:lpg2839 SsrA (tmRNA) binding protein                K03664     156      325     0.413      143     
xcc:XCC1466 small protein B                             K03664     167      325     0.361      144     
vch:VC_0848 small protein B                             K03664     161      324     0.378      143     
kfl:Kfla_2173 SsrA-binding protein                      K03664     173      323     0.387      142     
rru:Rru_A1864 SsrA-binding protein                      K03664     160      323     0.329      149     
cdn:BN940_09986 tmRNA-binding protein SmpB              K03664     154      322     0.396      144     
brh:RBRH_02709 SsrA-binding protein                     K03664     149      322     0.385      143     
cje:Cj1105 SsrA-binding protein                         K03664     150      322     0.383      149     
ctt:CtCNB1_2403 SsrA-binding protein                    K03664     157      321     0.380      142     
cja:CJA_3362 SsrA-binding protein                       K03664     159      321     0.372      145     
csa:Csal_3101 SsrA-binding protein                      K03664     157      320     0.354      147     
ppu:PP_4733 SsrA-binding protein                        K03664     160      320     0.392      143     
vvu:VV1_0371 SsrA-binding protein                       K03664     161      320     0.371      143     
pfr:PFREUD_09630 SmpB SsrA-binding protein              K03664     160      319     0.361      147     
pti:PHATRDRAFT_16021 hypothetical protein                          160      319     0.346      153     
xom:XOO1904 small protein B                             K03664     167      318     0.354      144     
mxa:MXAN_2057 SsrA-binding protein                      K03664     162      317     0.368      144     
sil:SPO3806 SsrA-binding protein                        K03664     158      317     0.347      144     
xac:XAC1513 small protein B                             K03664     167      314     0.354      144     
nar:Saro_1444 SsrA-binding protein                      K03664     160      312     0.363      146     
acb:A1S_0844 ssrA-binding protein (Small protein B)     K03664     158      311     0.396      144     
cvi:CV_3464 small protein B                             K03664     151      311     0.378      143     
son:SO_1473 SsrA-binding protein SmpB                   K03664     163      311     0.364      143     
xfa:XF_2348 conserved hypothetical protein              K03664     167      311     0.340      144     
ccr:CC_1196 small protein B                             K03664     152      308     0.347      144     
sur:STAUR_6205 SsrA-binding protein                     K03664     161      307     0.354      144     
tpa:TP_0184 small protein (smpB)                        K03664     134      307     0.383      128     
pfl:PFL_0819 SsrA-binding protein                       K03664     160      305     0.371      143     
apl:APL_0867 SsrA-binding protein                       K03664     159      304     0.400      145     
blo:BL1180 SsrA-binding protein                         K03664     199      303     0.356      146     
mpn:MPN_074 hypothetical protein                        K03664     147      302     0.377      146     
yen:YE0994 SsrA-binding protein (small protein B)       K03664     160      301     0.378      143     
aci:ACIAD2894 ssrA-binding protein (Small protein B)    K03664     158      300     0.368      144     
vfi:VF_2002 SsrA-binding protein                        K03664     161      299     0.368      144     
eca:ECA0836 SsrA-binding protein                        K03664     160      299     0.375      144     
abo:ABO_0305 ssrA-binding protein                       K03664     166      298     0.370      146     
hdu:HD_1134 SsrA-binding protein, small major protein B K03664     160      296     0.394      137     
smar:SM39_3288 trans-translation protein                K03664     160      295     0.375      144     
hel:HELO_4166 SsrA-binding protein                      K03664     163      294     0.357      140     
mge:MG_059 SsrA-binding protein                         K03664     145      293     0.404      146     
gox:GOX0060 SsrA-binding protein                        K03664     164      291     0.326      141     
yps:YPTB1135 SsrA-binding protein (small protein B)     K03664     160      290     0.357      143     
ypk:y3079 small protein B                               K03664     164      290     0.357      143     
ype:YPO1101 SsrA-binding protein (small protein B)      K03664     160      290     0.357      143     
tps:THAPSDRAFT_261283 ssrA binding protein                         143      289     0.340      144     
sfl:SF2679 SsrA-binding protein                         K03664     160      288     0.364      143     
ecs:ECs_3482 tmRNA-binding trans-translation protein    K03664     160      288     0.364      143     
eco:b2620 SsrA-binding protein                          K03664     160      288     0.364      143     
buc:BU254 small protein B                               K03664     162      287     0.364      143     
enc:ECL_03953 SsrA-binding protein                      K03664     160      285     0.352      145     
plu:plu3378 SsrA-binding protein (small protein B)      K03664     160      283     0.350      143     
cro:ROD_25691 SsrA small binding protein B              K03664     160      281     0.363      146     
esa:ESA_00635 hypothetical protein                      K03664     160      281     0.356      146     
ddd:Dda3937_02551 trans-translation protein             K03664     160      280     0.336      143     
eam:EAMY_2646 SsrA-binding protein (Small protein B)    K03664     173      280     0.356      146     
scl:sce2300 SmpB-like protein                           K03664     162      278     0.340      141     
sty:STY2874 SsrA (tmRNA)-binding protein                K03664     160      277     0.356      146     
stm:STM2688 small protein B                             K03664     160      277     0.356      146     
pam:PANA_2911 SmpB                                      K03664     160      276     0.336      146     
pmu:PM0217 SmpB                                         K03664     160      276     0.365      137     
hin:HI_0981 small protein B (smpB)                      K03664     161      275     0.372      137     
pmr:PMI1906 SsrA-binding protein (small protein B)      K03664     160      274     0.343      143     
kpn:KPN_02942 SsrA-binding protein                      K03664     160      268     0.345      145     
cps:CPS_3829 SsrA-binding protein                       K03664     162      258     0.324      136     
pif:PITG_04079 hypothetical protein                                180      195     0.307      140     
rfq:117035450 gastrula zinc finger protein XlCGF49.1-li            273      115     0.237      93      
mtr:25491184 CBL-interacting serine/threonine-protein k            457      111     0.257      144     
tva:4760637 hypothetical protein                                   307      110     0.248      137     
sly:101249654 kinase-interacting family protein-like               345      107     0.266      158     
sot:102596213 kinase-interacting family protein-like               345      106     0.266      158     
bmor:101745490 ATP-dependent 6-phosphofructokinase isof K00850     782      104     0.252      151     
vvi:100258072 asparagine--tRNA ligase, cytoplasmic 1    K01893     553      104     0.309      97      
hvo:HVO_1419 HTH-10 family transcription regulator                 225      103     0.271      70      
tre:TRIREDRAFT_121061 SMAD/FHA protein kinase           K06641     674      101     0.265      98      
dne:112980235 uncharacterized protein LOC112980235 isof            551       98     0.243      103     
nta:107788099 CBL-interacting serine/threonine-protein             467       98     0.270      89      
ocu:100357279 ceramide transfer protein isoform X1      K08283     624       97     0.225      80      
mdm:103422372 CBL-interacting serine/threonine-protein             496       97     0.258      89      
fca:123382372 zinc finger protein 550-like              K09228     574       96     0.237      76      
rcu:8275146 CBL-interacting serine/threonine-protein ki            509       96     0.247      89      
ath:AT5G45810 CBL-interacting protein kinase 19                    483       96     0.264      87      
cge:100765360 zinc finger protein 597 isoform X1        K09228     423       95     0.235      102     
tru:101063493 glutamine amidotransferase-like class 1 d K27835     253       95     0.253      146     
smm:Smp_030930.1 dph2-like, ovca                        K07561     413       95     0.226      133     
fvr:FVEG_06367 DNA-directed RNA polymerase I, II, and I K03013     236       94     0.252      131     
smo:SELMODRAFT_135206 hypothetical protein              K00899     450       93     0.308      65      
tbr:Tb11.01.6270 hypothetical protein, conserved                   605       93     0.221      104     
gla:GL50803_0016903 Ankyrin repeat protein 1                       789       92     0.179      123     
ncr:NCU05493 hypothetical protein                                  656       92     0.242      128     
cfa:100685539 zinc finger protein 599-like              K09228     390       92     0.220      91      
cne:CNC00320 hypothetical protein                                  750       90     0.231      147     
cpoc:100717577 ankyrin repeat domain-containing protein            321       89     0.241      137     
gmx:106794400 uncharacterized protein LOC106794400                 204       89     0.257      74      
nve:116607509 uncharacterized protein LOC116607509 isof            174       87     0.236      110     
bta:508633 T-cell surface glycoprotein CD8 beta chain p K06459     210       85     0.254      142     
tcr:505171.44 hypothetical protein                                  94       84     0.262      65      
pmur:114923595 interleukin-11-like                      K05417     199       83     0.397      58      
xtr:100486039 homeobox protein Hox-C4                   K09304     297       83     0.212      99      

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