SSDB Motif Search Result


Organism : Apteryx mantelli mantelli (North Island brown kiwi)
Gene : 106491788
Definition : K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] | (RefSeq) DHX8; DEAH-box helicase 8
Motif idFromToDefinitionE valueScore
pf:GIPC1_GH21974 0.0022-
pf:PRP38_assoc129220Pre-mRNA-splicing factor 38-associated hydrophilic C-term 0.093-
pf:Transformer150212Fruit fly transformer protein 0.53-
pf:OB_RRP5_4th230298 0.53-
pf:S1234303S1 RNA binding domain 3.1e-13-
pf:Sigma54_activ_2536578Sigma-54 interaction domain 0.43-
pf:nSTAND_NTPase5541578 0.3-
pf:TsaE541579Threonylcarbamoyl adenosine biosynthesis protein TsaE 0.28-
pf:DEAD544693DEAD/DEAH box helicase 4.4e-06-
pf:PhoH544568PhoH-like protein 0.29-
pf:nSTAND3545573 0.042-
pf:AAA_16545583AAA ATPase domain 0.19-
pf:AAA_19547662AAA domain 0.01-
pf:T2SSE548576Type II/IV secretion system protein 0.12-
pf:AAA_22552686AAA domain 0.00032-
pf:Flavi_DEAD552691Flavivirus DEAD domain 0.072-
pf:Helicase_C736867Helicase conserved C-terminal domain 5.8e-11-
pf:Cas3-like_C_2804866 0.39-
pf:WHD_HA2929957 7.3e-10-
pf:HA2_C9581017 2e-14-
pf:OB_NTP_bind10751151Oligonucleotide/oligosaccharide-binding (OB)-fold 8.3e-29-

aam:106491788 pf:GIPC1_GH2 pf:PRP38_assoc pf:Transformer pf:OB_RRP5_4th pf:S1 pf:Sigma54_activ_2 pf:nSTAND_NTPase5 pf:TsaE pf:DEAD pf:PhoH pf:nSTAND3 pf:AAA_16 pf:AAA_19 pf:T2SSE pf:AAA_22 pf:Flavi_DEAD pf:Helicase_C pf:Cas3-like_C_2 pf:WHD_HA2 pf:HA2_C pf:OB_NTP_bind

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