SSDB Motif Search Result


Organism : Apteryx mantelli mantelli (North Island brown kiwi)
Gene : 106491788
Definition : K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] | (RefSeq) DHX8; DEAH-box helicase 8
Motif idFromToDefinitionE valueScore
pf:Presenilin101212Presenilin 1-
pf:Pol_alpha_B_N126225DNA polymerase alpha subunit B N-terminal 0.72-
pf:PRP38_assoc129220Pre-mRNA-splicing factor 38-associated hydrophilic C-term 0.064-
pf:Transformer150212Fruit fly transformer protein 0.37-
pf:S1234303S1 RNA binding domain 2.1e-13-
pf:Sigma54_activ_2536578Sigma-54 interaction domain 0.47-
pf:TsaE541579Threonylcarbamoyl adenosine biosynthesis protein TsaE 0.17-
pf:DEAD544693DEAD/DEAH box helicase 3.3e-06-
pf:PhoH544568PhoH-like protein 0.2-
pf:nSTAND3545572 0.029-
pf:AAA_16545584AAA ATPase domain 0.16-
pf:T2SSE546576Type II/IV secretion system protein 0.14-
pf:AAA_19547677AAA domain 0.0051-
pf:ABC_tran550585ABC transporter 0.84-
pf:AAA_22552686AAA domain 0.00022-
pf:Flavi_DEAD552691Flavivirus DEAD domain 0.049-
pf:Helicase_C736867Helicase conserved C-terminal domain 4.4e-11-
pf:HA2_N929957 3.8e-10-
pf:HA2_C9581017 1.4e-14-
pf:OB_NTP_bind10751151Oligonucleotide/oligosaccharide-binding (OB)-fold 1e-29-

aam:106491788 pf:Presenilin pf:Pol_alpha_B_N pf:PRP38_assoc pf:Transformer pf:S1 pf:Sigma54_activ_2 pf:TsaE pf:DEAD pf:PhoH pf:nSTAND3 pf:AAA_16 pf:T2SSE pf:AAA_19 pf:ABC_tran pf:AAA_22 pf:Flavi_DEAD pf:Helicase_C pf:HA2_N pf:HA2_C pf:OB_NTP_bind

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