| Motif id | From | To | Definition | E value | Score |
| pf:HTH_3 | 2 | 42 | Helix-turn-helix
| 0.00085 | - |
| pf:HTH_26 | 2 | 32 | Cro/C1-type HTH DNA-binding domain
| 0.51 | - |
| pf:LacI | 4 | 49 | Bacterial regulatory proteins, lacI family
| 4e-22 | - |
| pf:HTH_Tnp_ISL3 | 4 | 24 | Helix-turn-helix domain of transposase family ISL3
| 0.39 | - |
| pf:AsnC_trans_reg_3 | 29 | 85 | | 0.13 | - |
| pf:Peripla_BP_1 | 62 | 320 | Periplasmic binding proteins and sugar binding domain of LacI family
| 4.4e-36 | - |
| pf:Peripla_BP_4 | 63 | 313 | Periplasmic binding protein domain
| 4.4e-21 | - |
| pf:DUF2325 | 81 | 149 | Uncharacterized protein conserved in bacteria (DUF2325)
| 0.62 | - |
| pf:Peripla_BP_3 | 172 | 332 | Periplasmic binding protein-like domain
| 2.6e-45 | - |