| Motif id | From | To | Definition | E value | Score |
| pf:ResIII | 205 | 253 | Type III restriction enzyme, res subunit
| 0.23 | - |
| pf:DEAD | 213 | 263 | DEAD/DEAH box helicase
| 0.036 | - |
| pf:UvrD-helicase | 214 | 263 | UvrD/REP helicase N-terminal domain
| 0.00017 | - |
| pf:AAA_30 | 214 | 267 | AAA domain
| 0.07 | - |
| pf:PhoH | 214 | 252 | PhoH-like protein
| 0.1 | - |
| pf:AAA_19 | 217 | 580 | AAA domain
| 1.6e-10 | - |
| pf:AAA_16 | 218 | 302 | AAA ATPase domain
| 0.13 | - |
| pf:DUF2075 | 227 | 250 | Uncharacterized conserved protein (DUF2075)
| 0.094 | - |
| pf:NACHT | 228 | 262 | NACHT domain
| 0.29 | - |
| pf:UvrD-helicase | 359 | 580 | UvrD/REP helicase N-terminal domain
| 2.1e-09 | - |
| pf:DUF2075 | 508 | 640 | Uncharacterized conserved protein (DUF2075)
| 0.05 | - |
| pf:AAA_30 | 509 | 624 | AAA domain
| 0.11 | - |
| pf:Viral_helicase1 | 531 | 748 | Viral (Superfamily 1) RNA helicase
| 0.019 | - |
| pf:UvrD_C | 601 | 679 | UvrD-like helicase C-terminal domain
| 0.00014 | - |
| pf:UvrD_C | 698 | 755 | UvrD-like helicase C-terminal domain
| 1e-05 | - |
| pf:UvrD_C_2 | 704 | 751 | UvrD-like helicase C-terminal domain
| 7.2e-10 | - |