| Motif id | From | To | Definition | E value | Score |
| pf:GntR | 26 | 89 | Bacterial regulatory proteins, gntR family
| 2.5e-21 | - |
| pf:Sca2 | 39 | 68 | | 0.088 | - |
| pf:Rrf2 | 47 | 86 | Transcriptional regulator
| 0.059 | - |
| pf:HTH_41 | 48 | 80 | Helix-turn-helix domain
| 0.11 | - |
| pf:DUF977 | 50 | 94 | Bacterial protein of unknown function (DUF977)
| 0.23 | - |
| pf:HTH_Crp_2 | 51 | 84 | Crp-like helix-turn-helix domain
| 0.33 | - |
| pf:HTH_DeoR | 53 | 90 | DeoR-like helix-turn-helix domain
| 3.9e-05 | - |
| pf:HTH_11 | 53 | 84 | HTH domain
| 0.00026 | - |
| pf:RPA_C | 53 | 81 | Replication protein A C terminal
| 0.11 | - |
| pf:MarR_2 | 53 | 80 | MarR family
| 0.12 | - |
| pf:DIP2311-like_C | 54 | 85 | | 0.088 | - |
| pf:PaaX | 54 | 85 | PaaX-like protein
| 0.32 | - |
| pf:HTH_36 | 55 | 79 | Helix-turn-helix domain
| 0.09 | - |
| pf:Peripla_BP_1 | 102 | 368 | Periplasmic binding proteins and sugar binding domain of LacI family
| 4.8e-20 | - |
| pf:Peripla_BP_4 | 104 | 325 | Periplasmic binding protein domain
| 9.2e-13 | - |
| pf:Peripla_BP_3 | 215 | 378 | Periplasmic binding protein-like domain
| 5.1e-34 | - |