| Motif id | From | To | Definition | E value | Score |
| pf:LacI | 3 | 48 | Bacterial regulatory proteins, lacI family
| 7.7e-16 | - |
| pf:HTH_AraC | 3 | 21 | Bacterial regulatory helix-turn-helix proteins, AraC family
| 0.019 | - |
| pf:DUF7342 | 3 | 94 | | 0.066 | - |
| pf:HTH_Crp_2 | 3 | 23 | Crp-like helix-turn-helix domain
| 0.91 | - |
| pf:HTH_24 | 3 | 23 | Winged helix-turn-helix DNA-binding
| 0.96 | - |
| pf:HTH_IclR | 3 | 23 | IclR helix-turn-helix domain
| 0.42 | - |
| pf:HTH_38 | 4 | 22 | Helix-turn-helix domain
| 0.11 | - |
| pf:Peripla_BP_4 | 126 | 262 | Periplasmic binding protein domain
| 0.0017 | - |
| pf:Peripla_BP_1 | 127 | 310 | Periplasmic binding proteins and sugar binding domain of LacI family
| 3.3e-05 | - |
| pf:Peripla_BP_3 | 163 | 328 | Periplasmic binding protein-like domain
| 2.4e-41 | - |