| Motif id | From | To | Definition | E value | Score |
| pf:HTH_Tnp_ISL3 | 1 | 23 | Helix-turn-helix domain of transposase family ISL3
| 0.85 | - |
| pf:HTH_23 | 2 | 24 | Homeodomain-like domain
| 0.098 | - |
| pf:LacI | 3 | 48 | Bacterial regulatory proteins, lacI family
| 4.1e-16 | - |
| pf:HTH_3 | 3 | 29 | Helix-turn-helix
| 0.59 | - |
| pf:HTH_19 | 3 | 47 | Helix-turn-helix domain
| 0.11 | - |
| pf:HTH_AraC | 3 | 21 | Bacterial regulatory helix-turn-helix proteins, AraC family
| 0.028 | - |
| pf:HTH_24 | 3 | 23 | Winged helix-turn-helix DNA-binding
| 0.32 | - |
| pf:HTH_38 | 3 | 22 | Helix-turn-helix domain
| 0.48 | - |
| pf:HTH_40 | 3 | 71 | Helix-turn-helix domain
| 0.37 | - |
| pf:TnsD | 3 | 48 | Tn7-like transposition protein D
| 0.21 | - |
| pf:Peripla_BP_1 | 111 | 307 | Periplasmic binding proteins and sugar binding domain of LacI family
| 4e-05 | - |
| pf:Peripla_BP_4 | 126 | 262 | Periplasmic binding protein domain
| 0.019 | - |
| pf:Peripla_BP_3 | 163 | 328 | Periplasmic binding protein-like domain
| 2.4e-38 | - |