SSDB Motif Search Result
Organism :
Electrophorus electricus (electric eel)
Gene :
113574897
Definition :
K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] | (RefSeq) dhx8; ATP-dependent RNA helicase DHX8 isoform X1
Motif id
From
To
Definition
E value
Score
pf:S1
243
312
S1 RNA binding domain
1.6e-13
-
pf:Sigma54_activ_2
545
587
Sigma-54 interaction domain
0.38
-
pf:TsaE
549
588
Threonylcarbamoyl adenosine biosynthesis protein TsaE
0.13
-
pf:DEAD
552
702
DEAD/DEAH box helicase
5.6e-06
-
pf:AAA_16
553
593
AAA ATPase domain
0.13
-
pf:PhoH
553
577
PhoH-like protein
0.18
-
pf:nSTAND3
554
581
0.03
-
pf:T2SSE
554
585
Type II/IV secretion system protein
0.11
-
pf:AAA_19
556
670
AAA domain
0.0077
-
pf:ABC_tran
559
595
ABC transporter
0.45
-
pf:AAA_22
561
670
AAA domain
0.00095
-
pf:Flavi_DEAD
561
699
Flavivirus DEAD domain
0.21
-
pf:Helicase_C
745
876
Helicase conserved C-terminal domain
4.4e-11
-
pf:HA2_N
938
966
3.8e-10
-
pf:HA2_C
967
1026
1.6e-14
-
pf:OB_NTP_bind
1084
1160
Oligonucleotide/oligosaccharide-binding (OB)-fold
1e-29
-
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