| Motif id | From | To | Definition | E value | Score |
| pf:PBP1_TM | 2 | 75 | Transmembrane domain of transglycosylase PBP1 at N-terminal
| 1.1e-23 | - |
| pf:UvrB_inter | 107 | 184 | | 7.7e-05 | - |
| pf:UB2H | 109 | 193 | Bifunctional transglycosylase second domain
| 1.7e-26 | - |
| pf:Transgly | 205 | 375 | Transglycosylase
| 5.4e-56 | - |
| pf:Transpeptidase | 469 | 708 | Penicillin binding protein transpeptidase domain
| 6.9e-24 | - |
| pf:TFIIA | 790 | 827 | Transcription factor IIA, alpha/beta subunit
| 0.0093 | - |