| Motif id | From | To | Definition | E value | Score |
| pf:ArsR | 2 | 87 | ArsR transcriptional regulator
| 0.0086 | - |
| pf:TFIIE_alpha | 7 | 81 | TFIIE alpha subunit
| 0.045 | - |
| pf:HTH_20 | 15 | 61 | Helix-turn-helix domain
| 2.1e-10 | - |
| pf:HTH_50 | 16 | 51 | | 0.059 | - |
| pf:HTH_24 | 17 | 61 | Winged helix-turn-helix DNA-binding
| 2.4e-06 | - |
| pf:HTH_5 | 19 | 61 | Bacterial regulatory protein, arsR family
| 4.3e-07 | - |
| pf:MarR_2 | 21 | 68 | MarR family
| 5e-05 | - |
| pf:HTH_IclR | 21 | 59 | IclR helix-turn-helix domain
| 0.00014 | - |
| pf:Fe_dep_repress | 21 | 61 | Iron dependent repressor, N-terminal DNA binding domain
| 0.13 | - |
| pf:HTH_27 | 21 | 64 | Winged helix DNA-binding domain
| 0.13 | - |
| pf:Rrf2 | 21 | 61 | Transcriptional regulator
| 0.12 | - |
| pf:DUF2089 | 24 | 56 | Protein of unknown function (DUF2089)
| 0.18 | - |
| pf:HTH_30 | 25 | 56 | PucR C-terminal helix-turn-helix domain
| 0.099 | - |
| pf:HTH_11 | 27 | 58 | HTH domain
| 6.9e-05 | - |
| pf:TrmB | 27 | 63 | Sugar-specific transcriptional regulator TrmB
| 0.00034 | - |
| pf:MarR | 27 | 61 | MarR family
| 0.0066 | - |
| pf:HTH_22 | 31 | 51 | HTH domain
| 0.032 | - |
| pf:HTH_AsnC-type | 32 | 54 | AsnC-type helix-turn-helix domain
| 0.0098 | - |
| pf:HTH_36 | 32 | 60 | Helix-turn-helix domain
| 0.11 | - |
| pf:HTH_Crp_2 | 32 | 63 | Crp-like helix-turn-helix domain
| 0.18 | - |
| pf:HTH_DeoR | 33 | 60 | DeoR-like helix-turn-helix domain
| 0.28 | - |
| pf:PadR | 34 | 78 | Transcriptional regulator PadR-like family
| 0.0078 | - |
| pf:FUR | 37 | 76 | Ferric uptake regulator family
| 0.012 | - |