SSDB Motif Search Result


Organism : Rhizobium johnstonii
Gene : pRL120503
Definition : no KO assigned | (GenBank) putative MarR family transcriptional regulatory protein
Motif idFromToDefinitionE valueScore
pf:Coatomer_E47134Coatomer epsilon subunit 0.011-
pf:HTH_4748107winged helix-turn-helix 0.13-
pf:Staph_reg_Sar_Rot53127 0.0016-
pf:HVO_A0261_N54141 4.3e-05-
pf:MarR_260117MarR family 1.7e-12-
pf:MarR60116MarR family 3.4e-10-
pf:HTH_2760126Winged helix DNA-binding domain 0.00091-
pf:HVO_A011460112 0.023-
pf:HTH_2461107Winged helix-turn-helix DNA-binding 6.4e-05-
pf:HTH_IclR63110IclR helix-turn-helix domain 0.00057-
pf:HTH_3465131Winged helix DNA-binding domain 0.19-
pf:wHTH-PRTase_assc67143 0.13-
pf:B-block_TFIIIC72111B-block binding subunit of TFIIIC 0.16-
pf:HTH_6776163 0.0033-
pf:DUF857976131 0.21-
pf:HTH_Crp_277109Crp-like helix-turn-helix domain 0.0035-
pf:WHD_ArnR177130 0.35-
pf:PadR96131Transcriptional regulator PadR-like family 0.27-

rle:pRL120503 pf:Coatomer_E pf:HTH_47 pf:Staph_reg_Sar_Rot pf:HVO_A0261_N pf:MarR_2 pf:MarR pf:HTH_27 pf:HVO_A0114 pf:HTH_24 pf:HTH_IclR pf:HTH_34 pf:wHTH-PRTase_assc pf:B-block_TFIIIC pf:HTH_67 pf:DUF8579 pf:HTH_Crp_2 pf:WHD_ArnR1 pf:PadR

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