SSDB Motif Search Result


Organism : Rhizobium johnstonii
Gene : pRL120503
Definition : no KO assigned | (GenBank) putative MarR family transcriptional regulatory protein
Motif idFromToDefinitionE valueScore
pf:SMC_ScpB26121Segregation and condensation complex subunit ScpB 0.041-
pf:Coatomer_E47134Coatomer epsilon subunit 0.0075-
pf:HTH_4748107winged helix-turn-helix 0.12-
pf:MarR_260117MarR family 4.6e-13-
pf:MarR60116MarR family 2e-10-
pf:HTH_2760126Winged helix DNA-binding domain 0.00053-
pf:HTH_2461107Winged helix-turn-helix DNA-binding 5.4e-05-
pf:HTH_IclR63110IclR helix-turn-helix domain 0.0012-
pf:HTH_3465130Winged helix DNA-binding domain 0.12-
pf:B-block_TFIIIC72111B-block binding subunit of TFIIIC 0.047-
pf:HTH_Crp_278109Crp-like helix-turn-helix domain 0.0019-
pf:PadR96131Transcriptional regulator PadR-like family 0.19-

rle:pRL120503 pf:SMC_ScpB pf:Coatomer_E pf:HTH_47 pf:MarR_2 pf:MarR pf:HTH_27 pf:HTH_24 pf:HTH_IclR pf:HTH_34 pf:B-block_TFIIIC pf:HTH_Crp_2 pf:PadR


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