SSDB Motif Search Result


Organism : Rattus norvegicus (rat)
Gene : 309458
Definition : K14792 rRNA biogenesis protein RRP5 | (RefSeq) Pdcd11; protein RRP5 homolog
Motif idFromToDefinitionE valueScore
pf:OB_PDCD1174124 0.014-
pf:DUF850178153 0.0049-
pf:S1_RRP580170 3.9e-19-
pf:S182131S1 RNA binding domain 1-
pf:S1_RRP5184257 0.0012-
pf:S1186257S1 RNA binding domain 0.0015-
pf:DUF2110186211Uncharacterized protein conserved in archaea (DUF2110) 0.37-
pf:S1_RRP5278345 6.5e-17-
pf:OB_RRP5_4th362442 1.4e-05-
pf:S1_RRP5369435 7.3e-16-
pf:OB_PDCD11446508 0.055-
pf:S1_RRP5451516 6.2e-06-
pf:S1451522S1 RNA binding domain 5.6e-11-
pf:OB_RRP5_4th466511 0.26-
pf:S1_RRP5540610 0.00011-
pf:S1546610S1 RNA binding domain 5.5e-12-
pf:S1633672S1 RNA binding domain 0.92-
pf:S1_RRP5726797 5.2e-12-
pf:Spt6_S1726800 0.0087-
pf:S1727798S1 RNA binding domain 8e-08-
pf:S1_RRP5843910 1.4e-15-
pf:OB_RRP5917981 0.02-
pf:S1_RRP5922994 5.7e-16-
pf:OB_PDCD1110291130 1.6e-25-
pf:S110391104S1 RNA binding domain 1.4e-05-
pf:S1_RRP510411099 0.038-
pf:OB_PDCD1111451214 1-
pf:S1_RRP511511226 6.6e-15-
pf:S1_RRP512321302 7.2e-14-
pf:OB_PDCD1113161389 0.04-
pf:S1_RRP513261400 1.7e-15-
pf:NRDE-216071689NRDE-2, necessary for RNA interference 0.68-
pf:HAT_Syf1_CNRKL1_N16091692 0.00011-
pf:HAT_PRP39_C16121668 0.058-
pf:HAT_PRP39_N16121691 0.0084-
pf:HAT_Syf1_CNRKL1_C16221693 0.0055-
pf:Suf16261691Suppressor of forked protein (Suf) 0.098-
pf:CFAP70_TPR_C16561740 0.0022-
pf:HAT_Syf1_CNRKL1_N16581796 2.6e-07-
pf:ARM_TT2116781728 0.058-
pf:HAT_PRP39_C16951799 1.5e-07-
pf:Suf16961757Suppressor of forked protein (Suf) 0.19-
pf:PRP6_TPR16961816 1.1e-07-
pf:HAT_Syf1_CNRKL1_C16971789 5.4e-06-
pf:TPR_1416981737Tetratricopeptide repeat 0.037-
pf:CFAP70_mid_TPR16981795 7.5e-07-
pf:HAT_PRP39_N17001761 0.41-
pf:TPR_YpiA_C17001761 0.068-
pf:DUF701717011796 0.04-
pf:UTP6_C17321848 0.049-
pf:TPR_1917491803Tetratricopeptide repeat 0.13-
pf:NRDE-217511824NRDE-2, necessary for RNA interference 0.3-
pf:Suf17651870Suppressor of forked protein (Suf) 5.2e-09-
pf:TPR_617681797Tetratricopeptide repeat 0.62-
pf:HAT_PRP39_N17701864 5e-09-
pf:TPR_1417701807Tetratricopeptide repeat 0.025-
pf:ARM_TT21_5th17711828 0.096-
pf:HAT_Syf1_CNRKL1_N17861859 0.0031-
pf:HAT_Syf1_CNRKL1_C17921869 1.8e-05-
pf:HAT_PRP39_C17991869 0.0036-

rno:309458 pf:OB_PDCD11 pf:DUF8501 pf:S1_RRP5 pf:S1 pf:S1_RRP5 pf:S1 pf:DUF2110 pf:S1_RRP5 pf:OB_RRP5_4th pf:S1_RRP5 pf:OB_PDCD11 pf:S1_RRP5 pf:S1 pf:OB_RRP5_4th pf:S1_RRP5 pf:S1 pf:S1 pf:S1_RRP5 pf:Spt6_S1 pf:S1 pf:S1_RRP5 pf:OB_RRP5 pf:S1_RRP5 pf:OB_PDCD11 pf:S1 pf:S1_RRP5 pf:OB_PDCD11 pf:S1_RRP5 pf:S1_RRP5 pf:OB_PDCD11 pf:S1_RRP5 pf:NRDE-2 pf:HAT_Syf1_CNRKL1_N pf:HAT_PRP39_C pf:HAT_PRP39_N pf:HAT_Syf1_CNRKL1_C pf:Suf pf:CFAP70_TPR_C pf:HAT_Syf1_CNRKL1_N pf:ARM_TT21 pf:HAT_PRP39_C pf:Suf pf:PRP6_TPR pf:HAT_Syf1_CNRKL1_C pf:TPR_14 pf:CFAP70_mid_TPR pf:HAT_PRP39_N pf:TPR_YpiA_C pf:DUF7017 pf:UTP6_C pf:TPR_19 pf:NRDE-2 pf:Suf pf:TPR_6 pf:HAT_PRP39_N pf:TPR_14 pf:ARM_TT21_5th pf:HAT_Syf1_CNRKL1_N pf:HAT_Syf1_CNRKL1_C pf:HAT_PRP39_C

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