SSDB Motif Search Result


Organism : Rattus norvegicus (rat)
Gene : 309458
Definition : K14792 rRNA biogenesis protein RRP5 | (RefSeq) Pdcd11; protein RRP5 homolog
Motif idFromToDefinitionE valueScore
pf:S1_RRP580170 3.1e-19-
pf:S182131S1 RNA binding domain 0.83-
pf:S1_RRP5184257 0.00098-
pf:S1186257S1 RNA binding domain 0.0012-
pf:DUF2110186211Uncharacterized protein conserved in archaea (DUF2110) 0.29-
pf:S1_RRP5278345 5.2e-17-
pf:OB_RRP5_4th362442 1.2e-05-
pf:S1_RRP5369435 5.9e-16-
pf:S1_RRP5451516 5e-06-
pf:S1451522S1 RNA binding domain 4.5e-11-
pf:OB_RRP5_4th466511 0.21-
pf:S1_RRP5540610 8.8e-05-
pf:S1546610S1 RNA binding domain 4.4e-12-
pf:S1633672S1 RNA binding domain 0.74-
pf:S1_RRP5726797 4.1e-12-
pf:Spt6_S1726800 0.0069-
pf:S1727798S1 RNA binding domain 6.4e-08-
pf:S1_RRP5843910 1.1e-15-
pf:OB_RRP5917982 0.012-
pf:S1_RRP5922994 4.5e-16-
pf:S110391104S1 RNA binding domain 1.1e-05-
pf:S1_RRP510411099 0.031-
pf:S1_RRP511511226 5.2e-15-
pf:S1_RRP512321302 5.7e-14-
pf:S1_RRP513261400 1.4e-15-
pf:NRDE-216071689NRDE-2, necessary for RNA interference 0.57-
pf:HAT_Syf1_CNRKL1_N16091692 8.6e-05-
pf:HAT_PRP39_C16121668 0.047-
pf:HAT_PRP39_N16121691 0.0074-
pf:HAT_Syf1_CNRKL1_C16221692 0.0049-
pf:Suf16261690Suppressor of forked protein (Suf) 0.11-
pf:HAT_Syf1_CNRKL1_N16581775 1e-06-
pf:ARM_TT2116771729 0.033-
pf:HAT_Syf1_CNRKL1_C16851789 2.3e-06-
pf:HAT_PRP39_C16951798 1.2e-07-
pf:Suf16951757Suppressor of forked protein (Suf) 0.11-
pf:TPR_1516971765Tetratricopeptide repeat 0.63-
pf:TPR_1416981737Tetratricopeptide repeat 0.034-
pf:HAT_PRP39_N16991761 0.34-
pf:DUF701717001796 0.019-
pf:UTP6_C17321848 0.053-
pf:TPR_1917491804Tetratricopeptide repeat 0.1-
pf:NRDE-217511824NRDE-2, necessary for RNA interference 0.23-
pf:Suf17651870Suppressor of forked protein (Suf) 3.2e-09-
pf:TPR_617681797Tetratricopeptide repeat 0.49-
pf:HAT_PRP39_N17701864 4.5e-09-
pf:TPR_1417701807Tetratricopeptide repeat 0.022-
pf:ARM_TT21_5th17711828 0.059-
pf:HAT_Syf1_CNRKL1_N17861859 0.0024-
pf:HAT_Syf1_CNRKL1_C17921869 1.3e-05-
pf:HAT_PRP39_C17991869 0.0028-

rno:309458 pf:S1_RRP5 pf:S1 pf:S1_RRP5 pf:S1 pf:DUF2110 pf:S1_RRP5 pf:OB_RRP5_4th pf:S1_RRP5 pf:S1_RRP5 pf:S1 pf:OB_RRP5_4th pf:S1_RRP5 pf:S1 pf:S1 pf:S1_RRP5 pf:Spt6_S1 pf:S1 pf:S1_RRP5 pf:OB_RRP5 pf:S1_RRP5 pf:S1 pf:S1_RRP5 pf:S1_RRP5 pf:S1_RRP5 pf:S1_RRP5 pf:NRDE-2 pf:HAT_Syf1_CNRKL1_N pf:HAT_PRP39_C pf:HAT_PRP39_N pf:HAT_Syf1_CNRKL1_C pf:Suf pf:HAT_Syf1_CNRKL1_N pf:ARM_TT21 pf:HAT_Syf1_CNRKL1_C pf:HAT_PRP39_C pf:Suf pf:TPR_15 pf:TPR_14 pf:HAT_PRP39_N pf:DUF7017 pf:UTP6_C pf:TPR_19 pf:NRDE-2 pf:Suf pf:TPR_6 pf:HAT_PRP39_N pf:TPR_14 pf:ARM_TT21_5th pf:HAT_Syf1_CNRKL1_N pf:HAT_Syf1_CNRKL1_C pf:HAT_PRP39_C

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