SSDB Motif Search Result


Organism : Streptococcus pneumoniae 670-6B (serotype 6B)
Gene : SP670_0473
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) helicase, RecD/TraA family
Motif idFromToDefinitionE valueScore
pf:OB_YrrC482 6.1e-23-
pf:HHH_597136Helix-hairpin-helix domain 0.026-
pf:5_3_exonuc971285'-3' exonuclease, C-terminal SAM fold 0.16-
pf:HHH_RecD298123 0.61-
pf:DNA_pol_lambd_f98126Fingers domain of DNA polymerase lambda 0.98-
pf:HHH_RecD2148237 5.2e-27-
pf:RsgA_GTPase278367 0.013-
pf:AAA_11332395AAA domain 3.3e-05-
pf:AAA_30333520AAA domain 8.5e-38-
pf:UvrD-helicase334401UvrD/REP helicase N-terminal domain 0.00015-
pf:DEAD334480DEAD/DEAH box helicase 0.0002-
pf:AAA_19336473AAA domain 4.7e-40-
pf:nSTAND3343378 0.016-
pf:NPHP3_N344367 0.86-
pf:AAA_22347464AAA domain 0.067-
pf:AAA_29347369P-loop containing region of AAA domain 0.15-
pf:SLFN-g3_helicase347368 0.27-
pf:NTPase_1349368NTPase 0.73-
pf:AAA_28349365AAA domain 0.093-
pf:AAA350368ATPase family associated with various cellular activities (AAA) 0.96-
pf:Viral_helicase1351473Viral (Superfamily 1) RNA helicase 0.049-
pf:SH3_13574644 5.9e-16-
pf:Herpes_Helicase654707Helicase 0.58-
pf:Viral_helicase1655709Viral (Superfamily 1) RNA helicase 4.8e-05-
pf:UvrD_C_2661709UvrD-like helicase C-terminal domain 4.2e-19-
pf:UvrD_C665708UvrD-like helicase C-terminal domain 0.00032-
pf:AAA_12665711AAA domain 0.25-

snb:SP670_0473 pf:OB_YrrC pf:HHH_5 pf:5_3_exonuc pf:HHH_RecD2 pf:DNA_pol_lambd_f pf:HHH_RecD2 pf:RsgA_GTPase pf:AAA_11 pf:AAA_30 pf:UvrD-helicase pf:DEAD pf:AAA_19 pf:nSTAND3 pf:NPHP3_N pf:AAA_22 pf:AAA_29 pf:SLFN-g3_helicase pf:NTPase_1 pf:AAA_28 pf:AAA pf:Viral_helicase1 pf:SH3_13 pf:Herpes_Helicase pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C pf:AAA_12

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