SSDB Motif Search Result


Organism : Streptococcus pneumoniae 670-6B (serotype 6B)
Gene : SP670_0473
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) helicase, RecD/TraA family
Motif idFromToDefinitionE valueScore
pf:HHH_597136Helix-hairpin-helix domain 0.027-
pf:5_3_exonuc971345'-3' exonuclease, C-terminal SAM fold 0.12-
pf:HHH_498123Helix-hairpin-helix containing domain 0.54-
pf:DNA_pol_lambd_f98126Fingers domain of DNA polymerase lambda 0.76-
pf:HHH_4148237Helix-hairpin-helix containing domain 1.3e-26-
pf:RsgA_GTPase279367 0.012-
pf:AAA_11332395AAA domain 2.3e-05-
pf:AAA_30333520AAA domain 5.9e-38-
pf:UvrD-helicase334401UvrD/REP helicase N-terminal domain 0.0001-
pf:DEAD334479DEAD/DEAH box helicase 0.00013-
pf:AAA_19336473AAA domain 1.5e-40-
pf:T2SSE336367Type II/IV secretion system protein 0.13-
pf:nSTAND3344378 0.0097-
pf:PIF1344450PIF1-like helicase 0.79-
pf:AAA_29346369P-loop containing region of AAA domain 0.16-
pf:AAA_22347464AAA domain 0.046-
pf:SLFN-g3_helicase347368 0.21-
pf:NTPase_1349368NTPase 0.5-
pf:AAA_28349365AAA domain 0.086-
pf:AAA350368ATPase family associated with various cellular activities (AAA) 0.66-
pf:Viral_helicase1351473Viral (Superfamily 1) RNA helicase 0.034-
pf:SH3_13574644 6.9e-16-
pf:Herpes_Helicase654707Helicase 0.4-
pf:Viral_helicase1655709Viral (Superfamily 1) RNA helicase 3.3e-05-
pf:UvrD_C_2661709UvrD-like helicase C-terminal domain 7.7e-19-
pf:UvrD_C665708UvrD-like helicase C-terminal domain 0.0002-
pf:AAA_12665711AAA domain 0.17-

snb:SP670_0473 pf:HHH_5 pf:5_3_exonuc pf:HHH_4 pf:DNA_pol_lambd_f pf:HHH_4 pf:RsgA_GTPase pf:AAA_11 pf:AAA_30 pf:UvrD-helicase pf:DEAD pf:AAA_19 pf:T2SSE pf:nSTAND3 pf:PIF1 pf:AAA_29 pf:AAA_22 pf:SLFN-g3_helicase pf:NTPase_1 pf:AAA_28 pf:AAA pf:Viral_helicase1 pf:SH3_13 pf:Herpes_Helicase pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C pf:AAA_12

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