SSDB Motif Search Result


Organism : Salmonella enterica subsp. enterica serovar Typhimurium LT2
Gene : STM2414
Definition : no KO assigned | (RefSeq) yfeD; putative negative regulator
Motif idFromToDefinitionE valueScore
pf:HTH_59139 0.23-
pf:HTH_3231Helix-turn-helix 0.0018-
pf:HTH_Tnp_ISL3230Helix-turn-helix domain of transposase family ISL3 0.026-
pf:HTH_7226Helix-turn-helix domain of resolvase 0.39-
pf:HTH_23330Homeodomain-like domain 3.6e-05-
pf:HTH_28330Helix-turn-helix domain 0.11-
pf:HTH_Tnp_4330Helix-turn-helix of DDE superfamily endonuclease 0.52-
pf:HTH_Crp_2429Crp-like helix-turn-helix domain 0.00033-
pf:HTH_11428HTH domain 0.04-
pf:HTH_20526Helix-turn-helix domain 0.052-
pf:HTH_26630Cro/C1-type HTH DNA-binding domain 0.028-
pf:HTH_DeoR626DeoR-like helix-turn-helix domain 0.039-
pf:TnsD683Tn7-like transposition protein D 0.36-
pf:TrmB629Sugar-specific transcriptional regulator TrmB 0.64-
pf:Crp726Bacterial regulatory proteins, crp family 0.013-
pf:HTH_29730Winged helix-turn helix 0.014-
pf:HTH_Tnp_1_2733Helix-turn-helix of insertion element transposase 0.063-
pf:Sigma70_r4727Sigma-70, region 4 0.21-
pf:HVO_A0261_N730 0.37-
pf:HTH_AsnC-type726AsnC-type helix-turn-helix domain 0.55-
pf:YfeC-like8128 3e-59-
pf:HTH_17850Helix-turn-helix domain 1e-06-
pf:Sigma70_r4_2829Sigma-70, region 4 0.44-
pf:MarR_2826MarR family 0.14-
pf:HTH_10830HTH DNA binding domain 0.28-
pf:MarR829MarR family 0.67-
pf:DUF1441931Protein of unknown function (DUF1441) 0.4-
pf:Phage_CI_repr1029Bacteriophage CI repressor helix-turn-helix domain 0.21-
pf:YdaS_toxin1130 0.018-
pf:Exc2157Excisionase-like protein 0.034-

stm:STM2414 pf:HTH_59 pf:HTH_3 pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_23 pf:HTH_28 pf:HTH_Tnp_4 pf:HTH_Crp_2 pf:HTH_11 pf:HTH_20 pf:HTH_26 pf:HTH_DeoR pf:TnsD pf:TrmB pf:Crp pf:HTH_29 pf:HTH_Tnp_1_2 pf:Sigma70_r4 pf:HVO_A0261_N pf:HTH_AsnC-type pf:YfeC-like pf:HTH_17 pf:Sigma70_r4_2 pf:MarR_2 pf:HTH_10 pf:MarR pf:DUF1441 pf:Phage_CI_repr pf:YdaS_toxin pf:Exc

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