SSDB Motif Search Result


Organism : Variovorax paradoxus S110
Gene : Vapar_2723
Definition : K03578 ATP-dependent RNA helicase HrpA [EC:5.6.2.6] | (GenBank) ATP-dependent helicase HrpA
Motif idFromToDefinitionE valueScore
pf:PhoH2449PhoH-like protein 0.27-
pf:AAA_252562AAA domain 0.34-
pf:DEAD26181DEAD/DEAH box helicase 4.3e-08-
pf:AAA_1926151AAA domain 0.0012-
pf:nSTAND32657 0.024-
pf:AAA_3029147AAA domain 0.15-
pf:T2SSE3253Type II/IV secretion system protein 0.041-
pf:AAA_2235174AAA domain 3.9e-05-
pf:AAA_233579AAA domain 0.028-
pf:SRP543594SRP54-type protein, GTPase domain 0.097-
pf:NACHT36188NACHT domain 5.9e-05-
pf:Helicase_C237359Helicase conserved C-terminal domain 9.7e-10-
pf:HA2_N423449 0.0033-
pf:HA2_C450505 7.5e-08-
pf:NTase-conflict487533 0.061-
pf:OB_NTP_bind580655Oligonucleotide/oligosaccharide-binding (OB)-fold 4.9e-11-
pf:DUF34186701286Domain of unknown function (DUF3418) 3.1e-210-
pf:Mei411311212Meiosis-specific protein Mei4 0.075-

vap:Vapar_2723 pf:PhoH pf:AAA_25 pf:DEAD pf:AAA_19 pf:nSTAND3 pf:AAA_30 pf:T2SSE pf:AAA_22 pf:AAA_23 pf:SRP54 pf:NACHT pf:Helicase_C pf:HA2_N pf:HA2_C pf:NTase-conflict pf:OB_NTP_bind pf:DUF3418 pf:Mei4

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