SSDB Motif Search Result


Organism : Aliivibrio salmonicida
Gene : VSAL_I0682
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; exodeoxyribonuclease V alpha chain
Motif idFromToDefinitionE valueScore
pf:RecD_N11113 1.7e-27-
pf:AAA_7210261P-loop containing dynein motor region D3 0.036-
pf:AAA_19223375AAA domain 6e-37-
pf:AAA_11223289AAA domain 2.2e-06-
pf:DEAD223345DEAD/DEAH box helicase 0.23-
pf:T2SSE223260Type II/IV secretion system protein 0.34-
pf:AAA_30225386AAA domain 1.5e-27-
pf:UvrD-helicase226315UvrD/REP helicase N-terminal domain 2.8e-08-
pf:nSTAND3228260 0.0088-
pf:TrwB_AAD_bind231262Type IV secretion-system coupling protein DNA-binding domain 0.13-
pf:AAA_22232368AAA domain 6e-08-
pf:NPHP3_N233266 0.72-
pf:Rad17233270Rad17 cell cycle checkpoint protein 0.6-
pf:ATPase233269KaiC 0.82-
pf:AAA_16234355AAA ATPase domain 0.0015-
pf:SLFN-g3_helicase235343 5.3e-05-
pf:CbiA236326CobQ/CobB/MinD/ParA nucleotide binding domain 0.0011-
pf:NAT10_TcmA_helicase237358 9.4e-11-
pf:Viral_helicase1237260Viral (Superfamily 1) RNA helicase 0.7-
pf:FtsK_SpoIIIE237262FtsK/SpoIIIE family 0.14-
pf:AAA_28237254AAA domain 0.08-
pf:SRP54237262SRP54-type protein, GTPase domain 0.38-
pf:NTPase_1237258NTPase 0.66-
pf:AAA238257ATPase family associated with various cellular activities (AAA) 0.83-
pf:AAA_11333374AAA domain 0.11-
pf:TraI_hel_assoc_N335366 0.11-
pf:SH3_13522581 2.6e-09-
pf:UvrD_C598650UvrD-like helicase C-terminal domain 0.0098-
pf:Viral_helicase1599648Viral (Superfamily 1) RNA helicase 0.0039-
pf:UvrD_C_2602646UvrD-like helicase C-terminal domain 7.3e-14-

vsa:VSAL_I0682 pf:RecD_N pf:AAA_7 pf:AAA_19 pf:AAA_11 pf:DEAD pf:T2SSE pf:AAA_30 pf:UvrD-helicase pf:nSTAND3 pf:TrwB_AAD_bind pf:AAA_22 pf:NPHP3_N pf:Rad17 pf:ATPase pf:AAA_16 pf:SLFN-g3_helicase pf:CbiA pf:NAT10_TcmA_helicase pf:Viral_helicase1 pf:FtsK_SpoIIIE pf:AAA_28 pf:SRP54 pf:NTPase_1 pf:AAA pf:AAA_11 pf:TraI_hel_assoc_N pf:SH3_13 pf:UvrD_C pf:Viral_helicase1 pf:UvrD_C_2

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