| Motif id | From | To | Definition | E value | Score |
| pf:RlmM_FDX | 4 | 72 | | 7.2e-28 | - |
| pf:Spt5-NGN | 7 | 62 | Early transcription elongation factor of RNA pol II, NGN section
| 0.0012 | - |
| pf:RLMM_N | 85 | 165 | | 4.7e-38 | - |
| pf:FtsJ | 187 | 281 | FtsJ-like methyltransferase
| 1.5e-09 | - |
| pf:MIT_C | 315 | 349 | Phospholipase D-like domain at C-terminus of MIT
| 0.35 | - |