Paracidovorax avenae: Acav_0346
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Entry
Acav_0346 CDS
T01445
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aaa
Paracidovorax avenae
Pathway
aaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acav_0346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaa03400
]
Acav_0346
Enzymes [BR:
aaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Acav_0346
DNA repair and recombination proteins [BR:
aaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Acav_0346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ADX44269
UniProt:
F0Q3M7
LinkDB
All DBs
Position
complement(386537..387352)
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AA seq
271 aa
AA seq
DB search
MDASLFKLTSLNLNGIRSAASKGVEAWIAETRPDCICVQEIKAQSADMEGRFETLAGLKG
HFHYATKKGYSGVGIYTRHEPTDVRVGYGSSEFDAEGRYVEARFDTPARKLSIISAYFPS
GSSGPERQLAKFRFLAEFHVHLMRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLP
EEREWMTKLLHQTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATP
AIAALARTESIYKQQKFSDHAPITVGYDLAI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttcccttttcaaattgaccagcctgaacctcaacggcatccgctccgccgcc
tcgaaaggcgtggaggcctggatcgccgagacgcggccggattgtatttgcgtgcaggag
atcaaggcccagtccgccgacatggaaggccgtttcgagaccctggccggcctcaagggg
catttccactacgcgaccaagaagggctactcgggcgtgggcatctatacccgccacgag
ccgaccgacgtgcgcgtgggctacggctcgtccgagttcgacgccgaaggccgctacgtg
gaggcgcgcttcgacacgcccgcgcgcaagctctcgatcatcagcgcgtattttccgagc
ggctcgtcgggccccgagcgccagctggccaagttccgcttcctggcggaattccacgtg
cacctgatgcgcgtgaaggaagagcgcgaattcatcctctgcggcgacgtcaacatcgcc
caccagcagatcgacctgaagaactggcgcagcaaccagaagaacagcggcttcctgccc
gaagagcgcgagtggatgacaaagttgttgcaccaaaccgacccgggcggcggcctcgtg
gacgtgtaccgcctgctgcagcccgacaccaccgagacggcctacacctggtggagcaac
cgcggacaggcctatgcgaacaacgtggggtggcggctggactaccacctcgccacgccg
gccatcgcggcgctggcgcgcaccgagtccatctacaagcagcagaagttctcggaccac
gcgccgatcaccgtgggctacgacctggcgatctga
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