Paracidovorax avenae: Acav_0445
Help
Entry
Acav_0445 CDS
T01445
Name
(GenBank) ATP dependent DNA ligase
Organism
aaa
Paracidovorax avenae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ADX44368
UniProt:
F0Q4J7
LinkDB
All DBs
Position
479628..481328
Genome browser
AA seq
566 aa
AA seq
DB search
MKDFAALYRALDASTSNLAKQAALQSYLRAAAPADAAWAVYFLAGGKPRQLVPTKLLRQF
AREAAGLPEWLFDESYEAVGDLAETIALLLPPPTDRHELGLAEWVEQHLLPLRGRTPEEL
EPVLRAQWARLAPEERLVYFKLITGAFRVGVSKLQVTQALAAVGGLDPKRVAQRLMGYTH
IGARPGAADYERLVAPQPEEGSGDGPEGGGSAETSGHPYPFFLAHPFSLPVEQFDATLGP
PGDWIVEWKWDGIRAQLVRRAGATWVWSRGEELVSDRFPELQRLGEEALPDGTVLDGEIV
VWQPADGDTAAHVRPFADLQKRIGRKTLGPKLLRELPVVLLAYDLLEEDGQDLRALPQHE
RRARLDALLARTAHPSLVASPVLHGASWQDLATQRAQARSLGVEGMMLKARGAQYGVGRT
KDVGTWWKWKIDPLSIDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGTDGRTLVPFAKAY
SGLTDAEMARVDAVIRRTTLETFGPVRSVKPTLVFELGFEGIARSARHKSGIAVRFPRML
RWREDKPVEEADSLETLEALLPRSDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttcgcggccctctaccgcgcgctggacgcgagcacctccaacctcgccaag
caggccgcgctccagtcgtacctgcgcgcggccgcgcctgccgatgcggcctgggccgtg
tatttcctcgcgggcggcaaaccgcgccagctcgtgccgaccaagctgctgcggcagttc
gcgcgcgaggcggccggcctgccggaatggctgttcgacgagagctacgaggccgtcggc
gaccttgccgaaaccatcgcgctgctgctgcccccacccaccgatcgccatgaactcggc
ttggcggaatgggtggagcagcacctgctgccgctgcggggccgcacgcccgaggaactg
gagccggtgctgcgtgcgcagtgggcccggctcgcgccggaagagcggctcgtgtacttc
aagctcatcacgggcgcgttccgcgtgggggtgtcgaagctgcaggtcacgcaggcgctg
gccgccgtgggcggcctggacccgaagcgcgtggcccagcgcctgatgggctacacccac
atcggcgcacggcccggggccgcggactacgaacgcctcgtggcgccgcaacccgaggag
ggcagcggcgacggccctgaaggcggcggcagcgcagagaccagcggccatccgtatccg
ttcttcctcgcgcaccctttctcgctgccggtggagcagttcgacgccacgctcggcccg
cccggcgactggatcgtggagtggaaatgggacggcatccgcgcccagctggtgcggcgc
gcaggtgccacctgggtctggtcgcgcggcgaggaactggtgagcgaccggttccccgag
ctgcagcggctgggcgaggaggccctgccggacggcacggtactggatggcgagatcgtc
gtctggcagcctgccgacggcgacaccgcggcccacgtgcggccgttcgcggatctgcag
aagcgcatcgggcgcaagacgctgggaccgaagctgctgcgcgagttgcccgtggtgctg
ctcgcctacgatctgctcgaagaggacggccaggatctgcgcgccctgccgcagcacgaa
cgccgcgcgcgcctggatgcgctgctcgcccgcaccgcgcacccgtcgctcgtggccagc
ccggtgctgcacggagcgagctggcaggacctcgccacgcagcgcgcgcaggcccgctcg
ctgggcgtggaggggatgatgctcaaggcccgcggtgcgcagtacggcgtgggccgcacc
aaggacgtggggacctggtggaagtggaagatcgatccgctcagcatcgatgcggtgctg
atctatgcgcagcgggggcacgggcgccgtgcgagcctctacagcgattacaccttcgcg
gtctgggacggcccgcccggcacggacggccgcacgctcgtgccgttcgcaaaggcgtac
tcgggcctgaccgatgccgagatggcgcgcgtggacgcggtcatccggcgcacgacgctc
gagaccttcgggcccgtgcgcagcgtgaagccgacgctggtgttcgagctcgggttcgag
gggatcgcgcgcagtgcgcggcacaagagcggcatcgcggtgcggtttccgcggatgctg
cggtggcgcgaggacaagccggtggaggaggcggattccctggagacgctggaggccctg
ttgcccaggtcggacccttga
DBGET
integrated database retrieval system
