Acidipropionibacterium acidipropionici CGMCC 1.2230: ASQ49_07290
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Entry
ASQ49_07290 CDS
T04523
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
aaci
Acidipropionibacterium acidipropionici CGMCC 1.2230
Brite
KEGG Orthology (KO) [BR:
aaci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ASQ49_07290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaci03400
]
ASQ49_07290
Enzymes [BR:
aaci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ASQ49_07290
DNA repair and recombination proteins [BR:
aaci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ASQ49_07290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
ALN15107
UniProt:
A0A806VHJ8
LinkDB
All DBs
Position
1670120..1671133
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AA seq
337 aa
AA seq
DB search
MAAESDTDTSDHHEPLLEEGPKSRTVEVDGHRLKLTHLDKVMYPQTGTTKRDVINFYWQV
APRLIEHAHDRPVTRKRWVDGVGTSDEPGESFFQKNAGRDTPDWVPRVSIEYVRKTNEHP
LVNEPAVLVWLGQTATLEIHTPQWRAYSTGRRHRPDRLVLDLDPGEGVELTGCAQVALQA
REVLADIGLDAVPVTSGSKGIHIYAPLDGSWTWKKASESAHRLAQSLEKEHADQVTTSMD
RAERAGKVFIDWSQNNTNKTTVAPWSFRGRLRPTVAVPRLWEEIEDSQLRQLDHSEALER
LNEPDPLSGAIGRLKRGCEPVPAGASSADQLNTITVV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagaatcggacaccgacacttcggaccaccatgagcccttgctggaggaggga
ccgaagtccaggaccgtcgaggtcgacggccaccggctcaagctgactcatctggacaag
gtgatgtacccgcagaccgggaccaccaagcgcgacgtcatcaatttctactggcaggtg
gctccgcggctcatcgagcacgcccacgacagaccggtcacccggaagcgctgggtggac
ggcgtcggcacctcggacgagccgggggagtccttcttccagaagaatgccggccgggac
acgccggactgggtgccccgggtcagcatcgaatacgtgcgcaagaccaatgagcatccg
ctcgtcaacgagccggctgtgctcgtctggctcgggcagaccgcgaccctggagatccac
accccgcagtggcgcgcctacagcacgggccggcgtcaccggccggaccggctggtcctg
gatctggatcctggcgagggggtcgaactgaccggctgtgcgcaggtcgcgctccaggcc
cgtgaggtgctcgccgacattgggctggacgcagtcccggtcaccagcggctccaagggc
atccacatctatgctccgcttgacgggtcgtggacctggaagaaggccagcgagtccgcg
caccggctcgcccagtcgctggagaaggagcacgccgaccaggtgaccaccagcatggac
cgggcggagcgggccgggaaggtcttcatcgactggagccagaacaacacgaacaagacg
acggtggcgccgtggtcatttcgcggccgactgcgccccacggtggcggtgccccggctc
tgggaggagatcgaggattcgcagcttcgccagttggatcacagcgaggcactggagcgc
ctgaacgagcctgatccgctcagtggggcgatcggccggctgaagcgcggctgcgagccg
gtgccggcgggggcgtcgtccgccgaccagctgaacacgatcaccgtcgtgtag
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integrated database retrieval system
