KEGG   Aureococcus anophagefferens: AURANDRAFT_36790
Entry
AURANDRAFT_36790  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03030  DNA replication
aaf03410  Base excision repair
aaf03420  Nucleotide excision repair
aaf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AURANDRAFT_36790
   03410 Base excision repair
    AURANDRAFT_36790
   03420 Nucleotide excision repair
    AURANDRAFT_36790
   03430 Mismatch repair
    AURANDRAFT_36790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aaf03032]
    AURANDRAFT_36790
   03400 DNA repair and recombination proteins [BR:aaf03400]
    AURANDRAFT_36790
Enzymes [BR:aaf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AURANDRAFT_36790
    6.5.1.6  DNA ligase (ATP or NAD+)
     AURANDRAFT_36790
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AURANDRAFT_36790
DNA replication proteins [BR:aaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AURANDRAFT_36790
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AURANDRAFT_36790
DNA repair and recombination proteins [BR:aaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AURANDRAFT_36790
   NER (nucleotide excision repair)
    Other NER factors
     AURANDRAFT_36790
   MMR (mismatch excision repair)
    Other MMR factors
     AURANDRAFT_36790
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 20221747
NCBI-ProteinID: XP_009035178
JGI: Auran1_36790
UniProt: F0Y4K7
LinkDB
Position
Unknown
AA seq 786 aa
MAGGSATLKAFFAPKKSKAAPKRASEESTSSTEAKDVAAPAAKKSKPEPAAPAGRLRRPD
RAASEASDDDELMAAAPAAAKAAPAEAPAAAAPAAAAPAAAKPAAEAAKPKEKQAPVFAN
PGAKASPAAPDWADAGCVPYAAIAAVFEKIEATTKRLEIQGHVRDLLGQVMRHAPGDLTA
CVFLLCNKVAPAFENLEMGIGDSLLMKAVAHAFGKNAKHVKGEYEKQGDLGIVAEDARKK
QKTLSFGAKPKPLLAAKVLAAYREICAISGSKSQDAKIGRMQKLMTAATPVEARYVTRGL
QGKLRIGLAESSVLVGLAHAAELWPTAAADAREDAAFANAEAPPDAHESLDDARAAAADA
VVKQCYAEAPSYATLCEGILSRPLWALPEACALAVGVPVFPMLAKPTKSVGEVLKRLGGI
AITCEHKYDGERFQAHMLPNGDVKVFSRNLQETTKKWPEVQAVVRAAAEARGTKSFVLDA
EVVAIDVKTGQLLPFQRLSTRKKEASVEDVTVDVIVMAFDLLFLDGESLLRKSLKERRAA
MRGGFAPAEHKFAFADAVDVPASCDECDAAEHIQHALEASIVAKSEGLMVKTLEANATYE
PSKRSLNWLKLKKDYLDGVGDSLDLVVVGAYMGRGKRTGVFGAYLCACLDADTGDLQSVC
KIGTGFSDEDLKTLDAQARAMVLPAKPRHVKCGDALEHDITWIEPKLVWEVQVADLSLSD
THKGALGRVKEGRGIGLRFPRLLRPRDDKTADEATNADQVLDMYLKQDSVKDAVAEEEED
DDDGYL
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggcgggaggcagcgcgacgctcaaggcgttcttcgcgcctaaaaagtccaaggccgcg
cccaagcgcgcgagcgaggagtcgacgtcgtcgacggaggccaaggacgtcgccgcgccc
gcggcgaagaagagcaagccggagcccgcggcgcccgccgggcgcctgcgcaggcccgac
cgcgcggcgtccgaggcgtcggacgacgacgagctcatggccgccgcgcccgccgcggcc
aaggcggcgcccgccgaggcgcccgcggccgccgcgcccgcggccgccgcgcccgcggcc
gcgaagcccgcggcggaggccgccaagcccaaggagaagcaggcgcccgtcttcgcgaac
ccgggcgcgaaggcgtcgcccgcggcgcccgactgggcggacgcgggctgcgtgccctac
gcggccatcgccgcggtcttcgagaagatcgaggcgacgacgaagcgcctcgagatccag
ggccacgtgcgcgacctgctgggccaggtcatgcgccacgcgccgggcgacctcaccgcg
tgcgtcttcctgctctgcaacaaggtcgcgccggccttcgagaacctggagatgggcatc
ggcgactcgctgctcatgaaggccgtggcccacgccttcggcaagaatgcgaagcacgtc
aagggcgagtacgagaagcagggcgacctcggcatcgtcgccgaagacgcgcggaagaag
cagaagacgctgagcttcggcgcgaagcccaagcccctcctcgcggccaaggtcctcgcg
gcctaccgcgagatctgcgccatctcgggctccaagtcccaggacgccaagatcggccgc
atgcagaagctcatgaccgcggcgacgcccgtcgaggcgcgctacgtgacgcgcggcctg
cagggcaagctccgcatcggcctcgccgagagctccgtgctcgtgggcctcgcccacgcc
gcggagctctggcccacggcggccgcggacgcgcgcgaggacgccgcgttcgcgaatgcg
gaggcgccgcccgacgcgcacgagtcgctcgacgacgcgcgcgcggccgcggccgacgcc
gtcgtcaagcagtgctacgcggaggcgccgagttacgcgacgctctgcgagggcatcctc
tcgcggccgctctgggccctgcccgaggcctgcgccctcgccgtcggcgtgcccgtcttc
cccatgctcgccaagccgacgaagtccgtcggcgaggtgctcaagcggctgggcggcatc
gcgatcacgtgcgagcacaagtacgacggcgagcgcttccaggcccacatgctccccaac
ggcgacgtcaaggtcttctcgcgcaacctccaggagacgacgaagaagtggcccgaggtc
caggccgtcgtccgcgcggccgcggaggccaggggcacgaaatcgttcgtcctcgacgcc
gaggtcgtcgccatcgacgtcaagacgggccagctcctgccgttccagcgcctgtccacg
cgcaagaaggaggcgtccgtggaggacgtcacggtcgacgtcatcgtcatggccttcgac
ctcctcttcctcgacggcgagagcctgctccggaagtcgctcaaggagcgccgcgcggcg
atgcgcggcggcttcgcgcccgcggagcacaagttcgccttcgccgacgccgtcgacgtg
cccgcgtcctgcgacgagtgcgacgccgcggagcacatccagcacgcgctcgaggcgtcc
atcgtcgccaagtccgaggggctcatggtgaagacgctcgaggcgaacgcgacctacgag
ccgtcgaagcggtccctcaactggctcaagctcaagaaggactacctcgacggcgtcggc
gactcgctggatctggtcgtcgtcggcgcgtacatgggccggggcaagcggacgggcgtc
ttcggcgcgtacttgtgcgcgtgcctcgacgcggacacgggcgacctccagagcgtctgc
aagatcggcacggggtttagcgacgaggacctcaagacgctcgacgcccaggcgcgggcc
atggtgctccccgcgaagccgcgccacgtgaaatgcggcgacgcgctcgagcacgacatc
acgtggatcgagcccaagctcgtctgggaggtccaggtcgcggacctgagcctctccgac
acgcacaagggcgccctgggccgcgtcaaggagggccgcggcatcggcctccgcttcccg
cggctcctccggccccgcgacgacaagaccgcggacgaggcgacgaacgcggaccaggtc
ctcgacatgtacctcaagcaggactccgtcaaggacgccgtcgcggaggaggaggaggac
gacgacgacggctacctctag

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