Aedes aegypti (yellow fever mosquito): 5576233
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Entry
5576233 CDS
T01053
Name
(RefSeq) putative mediator of RNA polymerase II transcription subunit 12
KO
K14323
protein CASC3
Organism
aag
Aedes aegypti (yellow fever mosquito)
Pathway
aag03013
Nucleocytoplasmic transport
aag03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
5576233
03015 mRNA surveillance pathway
5576233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aag03019
]
5576233
Messenger RNA biogenesis [BR:
aag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
5576233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
5576233
NCBI-ProteinID:
XP_021710512
LinkDB
All DBs
Position
3:complement(234688070..234738316)
Genome browser
AA seq
1164 aa
AA seq
DB search
MSEKPAQKLSESDDFTDNSVDNANDAAREDTSQQSGLATVESEYDTASDSPSDGEEYDDQ
EEDSDSQEEEELVTDGEEGEDDEEDDDGSDDDVIEVLDNERQSGDGQEQETDSKRKVDDD
EDRSNPQYIPKKGTFYEHDDRTLEDEEDGKAGDESVNNDDPAGPGGDRKVDKNAVSKATK
KWQASADRWTHDRFDESEQAPKSRAELVSAYGYDIRSEDGPPRARRRRRYARGPNRYTRN
WEDEDAYSKSNVVDHNRQRKVPRPEEFPELGTNNSKTRQNSRRSSKQLRSSGIGEREELM
ARQRPERRTSERSRGSNGNRSMGDRDRERGAERDRYEQPRSDRDRNDRERERNWDREREY
DQHGPDNYRDGRNDGGRYSSERMTNNNSYHNKENKISNRGSKEKDRRGSDYKVITSLQFK
NQTRNKTMDGSGMPITGGSGGVNPVVHSNSSGALSGSSNSNKMNNTIDRAQPVPDRMLDQ
RAVQQHHYQNQPPQMIQQAQQHQQQQQAIPHQQQQMAPPQPQVQQAQPQPQQIQHHQQAS
YVNDDHYDSYSDSKMPKDAKFPYNPPANATIQSVEIGQTDIAKYPTPAGQRTSKDQRQPV
LTSTAAVAMNTRSQISPRQIVSTQASQLTSIPTTQQLAHQQIQQQQSQQQQYQLQQQAQY
QQLHPMTTQSGPPTATQAPQTQVPPPQLQQQQAPSPLTQPPAAQMHNVHMGAPVSQQQLL
ANDNNSRSSKRYSSTRQRSTLDNPNVVVVQSPLHEQQQAQLLQQQQQQQLLLQQELQHQQ
QKLTSQTPKQNYQMNQPTLPLNLPSDYLVPNATQPAAVSKSQPTGQYQHPSAYYSATTPT
GSEFVAGTATQPVPVQQQPSVPVVPQPQNPLLSANQYQQYTAPSTGSHQYIQAPPPAAYI
PQTTPTPQPTPPTAPAAPPPQMMNYVPTIPPAPTQYPAAPYTGYQNFNTVVPQPVTPAVP
LTPPQPAAAAVYPSGITYYAPQSQTQTPRPLPSQRRPTSAIPILAPPERKSKNNRPGSDN
NSGPNTNLNEAEEANVSAAAAGGSGTTTSTTTAGAASDIDHILDNMFVQRPVFQPPIRKS
PSPAPTAAAGTAATGPSNAAPAGTADTTMGSDALKTAEMDSLDKIGESVKKLTIQEEKLP
LVDASGPEKLEIAPAVAPVDPTAG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaccagcacagaagctgtcggaatcggacgatttcaccgataattcagtg
gataatgccaacgatgcagcccgagaagacacatcgcaacagagcggattagccacagtc
gaatccgagtacgacacggcgtcagattcgccatccgacggcgaagagtacgacgatcaa
gaagaagacagcgatagccaagaggaggaagaactggtcaccgatggcgaagaaggcgaa
gacgacgaagaagatgacgacggatcggacgatgacgtcatcgaagttttggataacgaa
agacagagcggtgatggccaggagcaggaaacagacagtaagcgaaaagtggacgacgat
gaggatcgtagcaatccacagtacattcccaagaagggaaccttctacgagcacgacgat
cgcacgttggaagatgaagaagatggtaaggctggtgacgagagcgtgaacaacgatgat
ccagcaggaccaggtggtgaccgaaaggtggataagaatgcagtgtccaaggcgacaaag
aaatggcaagcgtcggctgatcgatggacgcacgatcggttcgatgaaagtgaacaggcc
ccgaaatcaagggccgaactggtttcagcctacgggtacgacatccgcagtgaagacggt
ccaccgcgggcccgtaggaggagacgttatgcgcgaggtccaaatcgatacactagaaat
tgggaagatgaggacgcatattcaaaatccaatgtggtagaccataaccgacagcgaaag
gttccaaggccagaggaattcccagagttgggtaccaacaacagtaaaacacgtcagaat
tctcggcgatctagcaaacaattgcgctcgtccggcattggagaacgagaagaactcatg
gcaagacagcgaccagagaggaggactagtgaacgcagtcgtggtagtaacggtaatcgt
agcatgggcgatcgcgaccgggaacgaggagctgaaagagataggtatgagcagcctcga
tcagatcgtgacagaaacgacagggagcgagaacgcaattgggatagggagcgtgaatat
gaccagcatggaccagataattatcgggatggtagaaatgatggtggtcgctatagttct
gaaaggatgacaaataacaacagctatcacaataaggagaacaaaattagtaatcgtggt
agcaaggagaaggatcgaagaggtagcgattataaggtaatcacatcgctacagtttaaa
aaccaaactcgaaataaaaccatggatggaagtggcatgccgattacgggtggcagtggg
ggtgttaacccagttgtacatagtaacagctctggagcattgtctggaagtagcaacagc
aacaagatgaataatacaatcgatcgtgcccaacctgtaccggatcgtatgttggatcaa
cgggccgtacaacaacaccactatcagaatcagccgccacaaatgatacaacaagcgcag
cagcatcaacaacaacagcaggcaattccacatcagcaacagcagatggctccaccacag
ccccaagtccagcaggcacaaccccagccacagcaaatccagcatcaccagcaagcgtct
tatgtgaatgatgaccattacgattcatacagtgattctaagatgccgaaagatgcaaag
ttcccatacaatccaccggcgaatgctactattcaatctgtcgaaattggccagactgac
attgctaaatacccgactccagcaggacagaggaccagcaaagaccagcgacaaccagtg
ctgacctctacagctgcggtggccatgaacacacgatctcaaatatccccacggcaaata
gtctccacgcaagccagtcaactaacatcaattccaacaactcaacaattagcacaccag
caaatacagcagcagcaatcgcagcagcaacaatatcaacttcaacagcaggcccaatac
caacagttgcatccaatgactacccagtcaggtccaccgacagcaacccaagctccacaa
acacaggttccgcctccgcagctacagcaacaacaagctccgtccccattgacgcaacca
cctgcagcgcaaatgcataacgttcatatgggtgcccccgtgagtcagcagcagttgctt
gccaacgataataattcccgatcgtcgaaacgatattccagtaccaggcaacgatccaca
ttggacaatccaaacgttgttgtagttcaatcaccactacacgaacaacagcaagcacaa
ttgttgcagcagcaacagcaacaacaattgctgctccaacaagaactgcaacaccaacaa
cagaagctcacttcacaaacacctaagcaaaactaccaaatgaatcagccgacgctgcct
ttgaacctgccgagcgattatctggttccgaatgcaacccaaccagccgcggtcagtaaa
tctcaaccaacaggtcaatatcagcacccatctgcgtactattcagcaactaccccaacc
ggaagcgaatttgtagccggtacagccacacaaccagtcccagtgcaacagcaaccctca
gtcccagtggtacctcagccccaaaatcccctgctttctgccaatcaataccaacaatat
acagcaccaagcacgggtagccaccagtacatccaagcaccaccgccagccgcttacata
ccccagacaactcccactccacaacctactcccccaactgctccagccgctccacctccc
cagatgatgaactacgttccgacgattccgcctgcacccactcaatacccggcagcccca
tataccggttaccaaaacttcaacaccgttgtccctcaaccggtaacgccagcagtcccc
ctcacacccccgcaaccggcagctgctgccgtatatcccagtggaatcacctactacgcc
cctcagtctcaaacgcaaacgccccggccactgccatcgcagcggcgtccgaccagtgca
atcccgatcttggccccgcccgagcgaaagtccaaaaacaatcgccccggttcggacaac
aactccggcccgaacaccaacctgaacgaagctgaggaagccaacgtttccgctgccgcc
gccggaggcagtggaacgacgaccagcaccaccacagcgggagctgccagtgacatcgat
cacatcctggacaatatgttcgtccaacggcccgtatttcagccaccgatccggaagagc
ccttcaccggcaccgacagccgccgcagggactgcagcgaccggcccaagcaacgctgcc
ccagccggaaccgccgatacgacaatggggtccgatgcgttgaaaactgccgaaatggat
tcgctggataagattggcgagtcggtgaagaaactcaccatacaggaagaaaagctcccc
ctggtcgacgcgagtggtccggaaaagctggaaatcgccccagcggtagccccagtggat
ccaacagccggttga
DBGET
integrated database retrieval system
