KEGG   Aedes aegypti (yellow fever mosquito): 5580279
Entry
5580279           CDS       T01053                                 
Name
(RefSeq) protein SCAF8 isoform X1
  KO
K13191  RNA-binding protein 16
Organism
aag  Aedes aegypti (yellow fever mosquito)
Brite
KEGG Orthology (KO) [BR:aag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aag03021]
    5580279
   03041 Spliceosome [BR:aag03041]
    5580279
Transcription machinery [BR:aag03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     5580279
Spliceosome [BR:aag03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    5580279
SSDB
Motif
Pfam: CID RRM_1 RRM_occluded RRM_5
Other DBs
NCBI-GeneID: 5580279
NCBI-ProteinID: XP_021708192
LinkDB
Position
3:40005413..40038142
AA seq 1334 aa
METVRVFNQELSGLYEAKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFISKCKSEYKI
PGLYVIDSIVRQSRHQFGAEKDVFAPRFARNMEQTFAHLFRCPPEDKSKIIRVLNLWQKN
MVFAPEVIQPLFDLANPEHPLHLQYNAAQAAGGGAEGSGGSNGMNTSALSHDSPGPMSHD
DHGSSAQTSETKGLDPNTIRQLQQFQQLLLRQTSGSDAHGSSKDQVKFNKKLLDFDYGSE
EDDDKNSPSVPSTSLPDGNNIAQILSDPNVLKQLQNLQKLKQEEKQTKLTEMRLQEEKFE
KHLASVLKVASNIHTADNKQLMNKLPFANECDLSRQPTTTIDLSGGIPSSKEGDGDDIVT
EVISDTHSSSPRSTAADQYKSSSSSRRRKSRSRSRDRRDRDRNRRRSRSRSRSRSRSHSR
GRGRGGRASSRDRDRDRTSQKDKERDKERERERKKRGLPEIKKEHLSVCSTTLWVGHLSK
LVQQEELSDTFGKYGDIVSIDLIPPRGCAFIVMNRRQDAYKSMQSLKNHKMHGRTITISW
ATGKGVKSKEWKDYWDIDLGCSYIPWSKLNHNTDLESLEEGGMLDEETMPPWMKDKITNA
SKKKDGDPAGIINPLYAVDTSQPPPTAAMMAGMPAMTTFPIGAVGAVGAVPRLPIMGLPI
VPGLGINVPPPNLMMASGINNPPPLPMAAGFGVLPPPPPSQGAPSNVAGGGDEMDIEMED
EGSNQSHGHPPGGIPPANAAFFNQPPPPLMPPNSLPFNRNQQENNGGDRGGFNRNENQDQ
DRRNRGDFDRRGGGRDRDRGGRDDRGDRGGRDDRDGRGRRNFRDNEGERNERPSRWGSND
RNNFGNRGGSDSGRDERPLSERLRELAGADFSQQQQRGGDGGNDGQQQFGGGRNFRGGRN
NNMNDGGDEFNNRGGNDFGGRGNFQQGGRFNNNQRGGGRFNNRGGGFMQNRGGPDGENMQ
AMNIMSLLNIDPFFGGNNNEQGGGDDEQQQQRFFDRGNEGGNFNNRRSNNWNEGGDRGGN
RGNRGGRGNWRDNNDGDGGGNDGGRGGRFGNRRNDQRNQRHNDFGGNQDEQPQQQQQQQQ
NQPNQQQQHRNEQPQMQQGGRGGGQGLRWDENDENWDDDVPVAKKRNVDPPKEDRQQQQQ
QQEQPQQQQQQQEHREERQGGGQKNKQSESHLGDGGDWDEPKEERTEGGKKHGGGGTPLF
DETHSGEQHQQQQQQQQPPQQEQQPQEQQQEPVRNPSPPPVVREPEPEPRQPSPEPQQHR
PQLYSPSPPPAAVAPPAAEPAFEAPAPNPEPTPAPVVPVSEPPQQMDAPAVADTPSSAPA
AAAAEESAAPAEDA
NT seq 4005 nt   +upstreamnt  +downstreamnt
atggaaacggttcgcgtgttcaatcaggagctctcggggctgtatgaggccaagccgccg
atctccaaggccaagatggcctcgattaccaggagtgcgatgaaggccatcaagttctac
aagcacgtcgtgcaaagtgtggagaagttcatctccaagtgcaagtcggagtacaagata
ccgggtctgtacgtgatcgattcgattgtgcgccaatcgaggcatcagttcggggcggag
aaggatgtttttgcgccgcgctttgcccgcaatatggagcaaacgtttgcgcacctgttc
cgctgtccgccggaggataagagtaaaatcatccgtgtgttgaacttgtggcagaagaac
atggtattcgcgccggaggtcatccaacctctcttcgatctggccaacccggagcatccg
ctgcacctgcagtacaacgctgcgcaagcggcgggtggcggtgccgaaggatccggtggt
tccaacggaatgaatacctcagccctgtcgcacgattcaccgggaccgatgtcccacgac
gaccacggtagttcggcacaaacgtcggaaacgaagggtctggatcccaacaccatccgg
cagttgcaacagttccagcaacttttgctgcgccaaaccagcggtagcgatgcccacggt
tccagcaaagatcaagtcaagttcaacaagaaactgctggactttgactacggtagcgaa
gaagacgacgacaagaactcgccgtcggttccctcgacttcgctgcccgacgggaacaac
attgcccagatcctgtcggacccgaatgtgctgaagcagctgcagaacctccagaagctg
aagcaggaagagaagcaaaccaagctcaccgagatgcgcctgcaggaggagaagttcgaa
aagcatctggccagcgtactcaaggtggctagcaatattcatactgccgacaacaagcag
cttatgaacaagctcccgtttgccaacgagtgtgacttgagtcgccagccgacgacgacc
atcgatctgagcggaggcattccttcatctaaagagggcgatggagacgacattgttaca
gaggtcatcagcgatacgcatagctcgtcaccacgaagcacggcagcagaccagtacaag
tcatcttcgtcttcgcgacgccgaaagagccgttcccgttcccgtgatcgccgtgaccgg
gaccgcaatcgtcgccgttcccgttccagatcgcgcagccggagtcgatcgcattcacga
ggacgtggccgtggaggacgtgcttcgtcccgagaccgcgatagagatcgtaccagccag
aaggacaaggaacgtgataaggaacgtgagagggagcgcaagaagcgtggactgccggag
atcaagaaggaacatctcagtgtttgcagtacgaccttgtgggttggccacctgtccaag
ttggttcaacaggaagagctatccgatacgtttggcaaatatggcgacattgttagcatc
gatttgatccctccccgcgggtgtgcatttatcgtaatgaatcgccgtcaggatgcgtac
aaaagtatgcaaagcctgaagaatcacaagatgcatggccggaccattaccatttcctgg
gccaccggtaaaggtgtcaagagcaaggaatggaaagattactgggatattgacttaggg
tgcagttacattccgtggagcaagctgaatcataataccgatctggaaagcttggaagag
ggaggcatgctggatgaagaaaccatgccaccgtggatgaaagacaagattacaaacgct
tccaagaagaaggacggtgatccggcaggcataatcaatccgttgtatgccgtcgatacc
agccaaccgccaccgacagctgcaatgatggccggaatgcctgcaatgaccacgttcccg
atcggtgccgttggagccgttggcgccgttccacgcttgcccataatgggacttccgatt
gtacccggtttgggtatcaacgttccgccgccgaacctcatgatggccagcggaataaac
aatcctccgccgcttccaatggctgccggatttggtgtgttgccgcctccgccgccatcc
cagggcgcaccttcgaacgtggccggaggtggtgatgaaatggacatcgagatggaagac
gaaggttcaaaccaaagccacgggcatccacccggagggataccaccggccaatgcggcc
ttcttcaaccagcctccgcctccgctgatgccgccaaattcactgccgttcaatcgcaat
cagcaggagaacaacggaggggaccgtggtggtttcaatcgaaacgaaaatcaagatcag
gatcgcagaaatcgtggcgatttcgatcgccgaggtggtggcagagatcgggaccgtgga
ggacgagacgatcgtggggaccggggtggtcgtgatgatcgggacggtcgtggcaggaga
aacttcagagacaatgaaggcgagcggaacgagcggccaagccgctggggaagcaatgat
cggaacaactttggcaaccgtggtggcagtgatagtggtcgcgatgaaaggcctctgtcc
gaaaggttgcgagagttggccggggcggactttagtcagcagcagcagcgtggtggcgac
ggcggcaacgatggacagcagcagtttggtggcggaaggaacttccgtggtggtcgcaat
aacaacatgaacgatggtggcgatgagttcaacaatcgcggtggtaacgatttcggaggt
cgtggtaacttccagcaaggtggtcgtttcaacaataaccagcgaggtggtggacgattc
aacaaccgtggcggtggattcatgcaaaatcgtggaggtccagatggcgaaaacatgcaa
gccatgaacataatgtcattgctcaacattgatcctttcttcggtggtaacaataacgag
caaggcggtggagacgacgagcaacagcagcagcggttcttcgatcgtggcaacgaaggt
ggtaacttcaataaccgacgttcgaacaactggaacgaaggtggcgatcgtggtggaaat
cgcggaaaccgtggagggcgtggcaactggagagataacaacgatggtgatggcggtgga
aacgatggtggccgaggaggacgctttggaaacagacgcaatgatcaaaggaatcaaaga
cataatgactttggaggaaatcaggatgaacaaccgcagcagcagcagcaacaacagcaa
aatcagccaaatcagcaacagcaacatcgtaatgagcaaccacagatgcaacaaggaggc
cgaggtggcggacaaggattgaggtgggatgaaaatgatgaaaactgggatgatgatgtt
ccggtggccaagaagcgtaatgtcgatccaccgaaggaagacagacaacaacaacagcag
caacaagaacaaccacagcagcagcaacagcaacaagaacatcgtgaagaaaggcaaggc
ggcggccaaaagaacaaacagtcggaatcgcaccttggtgatggaggagattgggatgaa
cctaaggaggaacgaactgaaggcggtaaaaagcacggaggtggtggcactcctcttttc
gatgaaacgcattccggagagcaacatcaacagcagcagcaacaacaacaacctcctcag
caggagcagcagccacaggaacaacagcaggaacctgtgaggaaccctagtcctcctccg
gtagtgcgagaacctgaaccggaaccaagacaaccctcgccggaaccgcagcaacataga
ccacagttgtattccccgtctccacctcctgctgcagtagcaccacctgctgccgaacct
gcatttgaagctccagctccgaatccagaaccgaccccggcaccagtagttccagtttcg
gaacctccgcagcaaatggacgccccagctgtagcagatacaccttcttcggctccagca
gcagcagcagcagaagaatcagccgctcccgccgaggatgcctaa

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