Aedes aegypti (yellow fever mosquito): 5580279
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Entry
5580279 CDS
T01053
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
aag
Aedes aegypti (yellow fever mosquito)
Brite
KEGG Orthology (KO) [BR:
aag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aag03021
]
5580279
03041 Spliceosome [BR:
aag03041
]
5580279
Transcription machinery [BR:
aag03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
5580279
Spliceosome [BR:
aag03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
5580279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
5580279
NCBI-ProteinID:
XP_021708192
LinkDB
All DBs
Position
3:40005413..40038142
Genome browser
AA seq
1334 aa
AA seq
DB search
METVRVFNQELSGLYEAKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFISKCKSEYKI
PGLYVIDSIVRQSRHQFGAEKDVFAPRFARNMEQTFAHLFRCPPEDKSKIIRVLNLWQKN
MVFAPEVIQPLFDLANPEHPLHLQYNAAQAAGGGAEGSGGSNGMNTSALSHDSPGPMSHD
DHGSSAQTSETKGLDPNTIRQLQQFQQLLLRQTSGSDAHGSSKDQVKFNKKLLDFDYGSE
EDDDKNSPSVPSTSLPDGNNIAQILSDPNVLKQLQNLQKLKQEEKQTKLTEMRLQEEKFE
KHLASVLKVASNIHTADNKQLMNKLPFANECDLSRQPTTTIDLSGGIPSSKEGDGDDIVT
EVISDTHSSSPRSTAADQYKSSSSSRRRKSRSRSRDRRDRDRNRRRSRSRSRSRSRSHSR
GRGRGGRASSRDRDRDRTSQKDKERDKERERERKKRGLPEIKKEHLSVCSTTLWVGHLSK
LVQQEELSDTFGKYGDIVSIDLIPPRGCAFIVMNRRQDAYKSMQSLKNHKMHGRTITISW
ATGKGVKSKEWKDYWDIDLGCSYIPWSKLNHNTDLESLEEGGMLDEETMPPWMKDKITNA
SKKKDGDPAGIINPLYAVDTSQPPPTAAMMAGMPAMTTFPIGAVGAVGAVPRLPIMGLPI
VPGLGINVPPPNLMMASGINNPPPLPMAAGFGVLPPPPPSQGAPSNVAGGGDEMDIEMED
EGSNQSHGHPPGGIPPANAAFFNQPPPPLMPPNSLPFNRNQQENNGGDRGGFNRNENQDQ
DRRNRGDFDRRGGGRDRDRGGRDDRGDRGGRDDRDGRGRRNFRDNEGERNERPSRWGSND
RNNFGNRGGSDSGRDERPLSERLRELAGADFSQQQQRGGDGGNDGQQQFGGGRNFRGGRN
NNMNDGGDEFNNRGGNDFGGRGNFQQGGRFNNNQRGGGRFNNRGGGFMQNRGGPDGENMQ
AMNIMSLLNIDPFFGGNNNEQGGGDDEQQQQRFFDRGNEGGNFNNRRSNNWNEGGDRGGN
RGNRGGRGNWRDNNDGDGGGNDGGRGGRFGNRRNDQRNQRHNDFGGNQDEQPQQQQQQQQ
NQPNQQQQHRNEQPQMQQGGRGGGQGLRWDENDENWDDDVPVAKKRNVDPPKEDRQQQQQ
QQEQPQQQQQQQEHREERQGGGQKNKQSESHLGDGGDWDEPKEERTEGGKKHGGGGTPLF
DETHSGEQHQQQQQQQQPPQQEQQPQEQQQEPVRNPSPPPVVREPEPEPRQPSPEPQQHR
PQLYSPSPPPAAVAPPAAEPAFEAPAPNPEPTPAPVVPVSEPPQQMDAPAVADTPSSAPA
AAAAEESAAPAEDA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggttcgcgtgttcaatcaggagctctcggggctgtatgaggccaagccgccg
atctccaaggccaagatggcctcgattaccaggagtgcgatgaaggccatcaagttctac
aagcacgtcgtgcaaagtgtggagaagttcatctccaagtgcaagtcggagtacaagata
ccgggtctgtacgtgatcgattcgattgtgcgccaatcgaggcatcagttcggggcggag
aaggatgtttttgcgccgcgctttgcccgcaatatggagcaaacgtttgcgcacctgttc
cgctgtccgccggaggataagagtaaaatcatccgtgtgttgaacttgtggcagaagaac
atggtattcgcgccggaggtcatccaacctctcttcgatctggccaacccggagcatccg
ctgcacctgcagtacaacgctgcgcaagcggcgggtggcggtgccgaaggatccggtggt
tccaacggaatgaatacctcagccctgtcgcacgattcaccgggaccgatgtcccacgac
gaccacggtagttcggcacaaacgtcggaaacgaagggtctggatcccaacaccatccgg
cagttgcaacagttccagcaacttttgctgcgccaaaccagcggtagcgatgcccacggt
tccagcaaagatcaagtcaagttcaacaagaaactgctggactttgactacggtagcgaa
gaagacgacgacaagaactcgccgtcggttccctcgacttcgctgcccgacgggaacaac
attgcccagatcctgtcggacccgaatgtgctgaagcagctgcagaacctccagaagctg
aagcaggaagagaagcaaaccaagctcaccgagatgcgcctgcaggaggagaagttcgaa
aagcatctggccagcgtactcaaggtggctagcaatattcatactgccgacaacaagcag
cttatgaacaagctcccgtttgccaacgagtgtgacttgagtcgccagccgacgacgacc
atcgatctgagcggaggcattccttcatctaaagagggcgatggagacgacattgttaca
gaggtcatcagcgatacgcatagctcgtcaccacgaagcacggcagcagaccagtacaag
tcatcttcgtcttcgcgacgccgaaagagccgttcccgttcccgtgatcgccgtgaccgg
gaccgcaatcgtcgccgttcccgttccagatcgcgcagccggagtcgatcgcattcacga
ggacgtggccgtggaggacgtgcttcgtcccgagaccgcgatagagatcgtaccagccag
aaggacaaggaacgtgataaggaacgtgagagggagcgcaagaagcgtggactgccggag
atcaagaaggaacatctcagtgtttgcagtacgaccttgtgggttggccacctgtccaag
ttggttcaacaggaagagctatccgatacgtttggcaaatatggcgacattgttagcatc
gatttgatccctccccgcgggtgtgcatttatcgtaatgaatcgccgtcaggatgcgtac
aaaagtatgcaaagcctgaagaatcacaagatgcatggccggaccattaccatttcctgg
gccaccggtaaaggtgtcaagagcaaggaatggaaagattactgggatattgacttaggg
tgcagttacattccgtggagcaagctgaatcataataccgatctggaaagcttggaagag
ggaggcatgctggatgaagaaaccatgccaccgtggatgaaagacaagattacaaacgct
tccaagaagaaggacggtgatccggcaggcataatcaatccgttgtatgccgtcgatacc
agccaaccgccaccgacagctgcaatgatggccggaatgcctgcaatgaccacgttcccg
atcggtgccgttggagccgttggcgccgttccacgcttgcccataatgggacttccgatt
gtacccggtttgggtatcaacgttccgccgccgaacctcatgatggccagcggaataaac
aatcctccgccgcttccaatggctgccggatttggtgtgttgccgcctccgccgccatcc
cagggcgcaccttcgaacgtggccggaggtggtgatgaaatggacatcgagatggaagac
gaaggttcaaaccaaagccacgggcatccacccggagggataccaccggccaatgcggcc
ttcttcaaccagcctccgcctccgctgatgccgccaaattcactgccgttcaatcgcaat
cagcaggagaacaacggaggggaccgtggtggtttcaatcgaaacgaaaatcaagatcag
gatcgcagaaatcgtggcgatttcgatcgccgaggtggtggcagagatcgggaccgtgga
ggacgagacgatcgtggggaccggggtggtcgtgatgatcgggacggtcgtggcaggaga
aacttcagagacaatgaaggcgagcggaacgagcggccaagccgctggggaagcaatgat
cggaacaactttggcaaccgtggtggcagtgatagtggtcgcgatgaaaggcctctgtcc
gaaaggttgcgagagttggccggggcggactttagtcagcagcagcagcgtggtggcgac
ggcggcaacgatggacagcagcagtttggtggcggaaggaacttccgtggtggtcgcaat
aacaacatgaacgatggtggcgatgagttcaacaatcgcggtggtaacgatttcggaggt
cgtggtaacttccagcaaggtggtcgtttcaacaataaccagcgaggtggtggacgattc
aacaaccgtggcggtggattcatgcaaaatcgtggaggtccagatggcgaaaacatgcaa
gccatgaacataatgtcattgctcaacattgatcctttcttcggtggtaacaataacgag
caaggcggtggagacgacgagcaacagcagcagcggttcttcgatcgtggcaacgaaggt
ggtaacttcaataaccgacgttcgaacaactggaacgaaggtggcgatcgtggtggaaat
cgcggaaaccgtggagggcgtggcaactggagagataacaacgatggtgatggcggtgga
aacgatggtggccgaggaggacgctttggaaacagacgcaatgatcaaaggaatcaaaga
cataatgactttggaggaaatcaggatgaacaaccgcagcagcagcagcaacaacagcaa
aatcagccaaatcagcaacagcaacatcgtaatgagcaaccacagatgcaacaaggaggc
cgaggtggcggacaaggattgaggtgggatgaaaatgatgaaaactgggatgatgatgtt
ccggtggccaagaagcgtaatgtcgatccaccgaaggaagacagacaacaacaacagcag
caacaagaacaaccacagcagcagcaacagcaacaagaacatcgtgaagaaaggcaaggc
ggcggccaaaagaacaaacagtcggaatcgcaccttggtgatggaggagattgggatgaa
cctaaggaggaacgaactgaaggcggtaaaaagcacggaggtggtggcactcctcttttc
gatgaaacgcattccggagagcaacatcaacagcagcagcaacaacaacaacctcctcag
caggagcagcagccacaggaacaacagcaggaacctgtgaggaaccctagtcctcctccg
gtagtgcgagaacctgaaccggaaccaagacaaccctcgccggaaccgcagcaacataga
ccacagttgtattccccgtctccacctcctgctgcagtagcaccacctgctgccgaacct
gcatttgaagctccagctccgaatccagaaccgaccccggcaccagtagttccagtttcg
gaacctccgcagcaaatggacgccccagctgtagcagatacaccttcttcggctccagca
gcagcagcagcagaagaatcagccgctcccgccgaggatgcctaa
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integrated database retrieval system